Actinoplanes ianthinogenes: Aiant_11100
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Entry
Aiant_11100 CDS
T07429
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
aih
Actinoplanes ianthinogenes
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aih03021
]
Aiant_11100
Transcription machinery [BR:
aih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Aiant_11100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_10
MarR
DUF134
GerE
DUF7343
HTH_3
Sigma70_ECF
HTH_24
HTH_Tnp_4
MarR_2
HTH_37
HTH_CodY
HTH_AraC
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
BCJ40453
LinkDB
All DBs
Position
complement(1183204..1183992)
Genome browser
AA seq
262 aa
AA seq
DB search
MATIELHGEQAYAAPEATATELLDAMAASPAGQDRSRLRDRAIEAWLPLARHLAHRYSGR
GEPTDDLVQTATVGLIKAVDKFDPDRGVDFAGYAIPTIIGEIKRHFRDRTWSVRVPRRLQ
ELRLAITEANSTLTHKLGRSPTVPDIAAHLGIGEEDVLEGLEGARAYNATSLSTPISADG
TTELGDTLGGEDHEYELAETRVALGPALASLDEREQRILTLRFYGNLTQSQIADQIGISQ
MHVSRLLTKALTKLRTQLANDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcgagcttcatggcgagcaggcgtacgccgcacccgaggccaccgccacc
gagctgctggacgcgatggccgcgtcaccggccggacaggatcgttcccggttgcgggac
cgggcgatcgaggcgtggctgcccctggcccggcacctcgcccatcggtattcggggcgt
ggcgagcccaccgacgacctggtgcagaccgcgacggtcggcctgatcaaagcggtcgac
aagttcgatccggaccgaggtgtcgacttcgccggttatgcgattcccaccatcatcggt
gagatcaagcggcatttccgtgaccgtacgtggtcggtccgcgtgccgcgccgcctccag
gagttgcggctggcgatcaccgaggcgaacagcactctgacccacaaactgggacgttct
cccaccgtgccggacatcgccgcccacctcgggatcggcgaggaggacgtgctggagggc
ctggagggcgcacgcgcctacaacgcgacgtccctgtccacgccgatcagcgcggacggc
accaccgagctcggcgacaccctcggcggcgaggaccatgagtacgagctggccgagacc
cgggtggcactcgggccggcgctcgcctccctcgacgagcgcgagcagcggatcctgacc
ctgcgcttctacggcaacctgacgcagtcgcagatcgccgaccagatcggcatcagccag
atgcacgtctcccggctgctgaccaaggccctcaccaagctccgcacccagctcgccaac
gacctgtaa
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