Actinoplanes ianthinogenes: Aiant_11860
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Entry
Aiant_11860 CDS
T07429
Symbol
pel
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih00040
Pentose and glucuronate interconversions
aih01100
Metabolic pathways
aih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Aiant_11860 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Aiant_11860 (pel)
Enzymes [BR:
aih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Aiant_11860 (pel)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BCJ40529
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All DBs
Position
complement(1272301..1273560)
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AA seq
419 aa
AA seq
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MVTFGLLLAGVATVPASAATGTVPAAAREVLPVDDGWANGTTGGSAATDDHVSVVRTRDE
LATALAVAGTAPRIILVAGTLRPDGDCASYADPGYSLDAFLAAYQGVTTKPAGPLEDARV
RSAKTQAADVQLKVPSNTTIFGLANARLVGLNLLVAGSDNVIIRNLRLEDAADCFPAWDP
TDGSAGNWNSAYDLITLTGSTHVWADHNTFSDGNNVDADQPLYYGRPYQVHDGALDVIRA
SDLVTISYNVFQEHDKTMLIGSTNTVGADVGKLRVTIHHNRFANTGQRVPRVRFGQVDVY
DNYYYATDEDTYQYSWGVGVYSAIYAENNFFLRSADIPLDAAVYNWGGPGMTEKGTLTRV
GTGPITEVNLLAEYNATHDPDLATDAGWTPTLRPGPLTPAARVPAVVTAQSGAGRLVLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtggtgacgttcggcctcctcctggccggcgtcgccaccgtccccgcatccgccgcgacc
ggcaccgtccccgccgccgcccgtgaggtcctccccgtcgacgacggctgggccaacggg
accaccggtggctccgccgccaccgacgaccacgtgtccgtcgtccggacccgtgacgaa
ctcgccaccgcgctggccgtcgccggcaccgcaccccggatcatcctggtcgccggcacc
ctccggcccgacggcgactgcgcctcctacgccgacccggggtattcgctcgacgcgttc
ctggccgcgtaccagggcgtgaccaccaaaccggccggtcccctcgaggacgcccgggtc
cgatccgcgaagacccaggccgccgacgtccagctcaaggtgccctccaacacgaccatc
ttcggcctggccaacgcccggctggtcgggctcaacctgctggtcgccggaagcgacaac
gtgatcatccgcaatctgcggctggaggacgccgccgactgcttcccggcctgggatccg
accgacggctcggccggcaactggaactcggcctacgacctgatcacgctgaccggttcc
acccacgtctgggcggaccacaacacgttcagcgacggcaacaacgtcgacgcggaccag
ccgctgtattacggccggccgtaccaggtgcacgacggcgcgctcgacgtgatccgggcc
tccgacctggtgacgatctcctacaacgtcttccaggaacacgacaagacgatgctgatc
ggttccaccaacacggtcggcgcggacgtcggcaagctgcgcgtcacgatccaccacaac
aggttcgccaacaccgggcagcgcgtcccccgtgtccgattcggacaggtggacgtctac
gacaactactactacgccaccgacgaggacacctaccagtactcctggggcgtcggcgtc
tactcggcgatctacgcggagaacaacttcttcctgcgcagcgccgacatcccgctcgac
gccgcggtctacaactggggcggccccgggatgaccgagaagggcaccctcacccgggtc
ggcaccggcccgatcaccgaggtgaacctgctggccgagtacaacgccacgcacgacccg
gacctggccaccgacgcggggtggacgcccacgctgcggcccggcccgctcaccccggcc
gcgcgggtgccggcggtggtcaccgcacagtccggcgcgggccgcctcgttctcaagtaa
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