Actinoplanes ianthinogenes: Aiant_33100
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Entry
Aiant_33100 CDS
T07429
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aiant_33100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aih03021
]
Aiant_33100
03019 Messenger RNA biogenesis [BR:
aih03019
]
Aiant_33100
Transcription machinery [BR:
aih03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Aiant_33100
Messenger RNA biogenesis [BR:
aih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Aiant_33100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
AAA_22
VWA_2
NACHT
PIP5K
Motif
Other DBs
NCBI-ProteinID:
BCJ42653
UniProt:
A0ABM7LTS7
LinkDB
All DBs
Position
complement(3664239..3666233)
Genome browser
AA seq
664 aa
AA seq
DB search
MSDTTDVTSGVSDVADGAGTTATATKRRRGGTGLSAMLLPELQSLAASLGISGTARMRKG
ELITAITERQSGGSAAAEPAPRPRTEAAPAAAPAQPAPAEKPKTAAAPAETTPAAPPAAE
AAPAAERPSRRSRERAARESAPRETAPAAQPAVETAPAPAAAATETAPADTTERVERGER
PERSDRNRDRQRNQRDGERGDRGERSERGERGERNTDRNDRTDRTDRSGDRGPRADQGHD
DDDNDGEGGRRSRRSRFRDRRRGRDRDDNQRDDSRRDGGREPHVAEDEVLVPVAGILDVL
DNYAFVRTTGYLSGPNDVYVSMSQVKKYGLRRGDAVTGAVRSAPRDGEQRRDKYNPLVRL
DTINGMEPDEARRRPEFYKLTPLYPQERLRLETEPHILTTRVIDLVMPIGKGQRALIVSP
PKAGKTMVLQALANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVVAATFDRPPQDH
TTVAELAIERAKRLVELGHDVVVLLDSVTRLGRSYNLAAPASGRIMSGGIDSTALYPPKR
FLGAARNIENGGSLTILATALVETGSMMDTVIFEEFKGTGNAELKLDRKIADKRVFPAVD
VSASGTRKEEILMGKEELAIIHKLRKVLSSLESGAALDLLLDRLKQTRTNIEFLMQIAKS
TPGE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgtcgggtgtttctgacgtcgctgacggcgccggcacc
accgcgaccgccacgaagcgccgccgcggcggcaccgggctgtccgcgatgctgctgccc
gagttgcagagcctcgccgcctccctgggcatctccggcaccgcccggatgcgcaagggc
gagctgatcaccgcgatcaccgagcggcagagcggcggatccgccgccgccgagccggct
ccccggccgcggaccgaggccgctccggccgccgcccccgcgcagccggccccggccgag
aagccgaagaccgcagccgccccggccgagaccaccccggccgcaccgccggccgccgag
gccgccccggccgcggagcgcccgtcccggcgcagccgcgagcgggccgcccgtgagtcg
gcgccccgcgagaccgccccggcggctcagccggccgtcgagaccgcgccggccccggcc
gccgcggccaccgagaccgcgccggccgacaccaccgagcgggtcgagcggggcgagcgc
cccgagcgcagcgaccgtaaccgtgaccggcagcgcaaccagcgcgacggcgagcggggc
gatcgcggggagcgctccgagcgtggcgagcggggcgagcggaacaccgatcgcaacgac
cgcaccgaccgcaccgaccggtccggcgaccggggtccgcgcgccgaccagggtcacgac
gacgacgacaacgacggcgagggcggccgccggagccggcgcagccgcttccgggaccgt
cgccgcggccgcgaccgcgacgacaaccagcgtgacgacagccgtcgtgacggtggccgg
gagccgcacgtcgccgaggacgaggtgctcgtcccggtggccggcatcctggacgtgctg
gacaactacgcgttcgtccggaccaccggttacctctccgggccgaacgacgtctacgtg
tcgatgtcgcaggtcaagaagtacgggctgcgccgcggcgacgcggtgaccggcgcggtg
cgctccgccccgcgcgacggcgagcagcggcgggacaagtacaacccgctggtccgcctg
gacaccatcaacgggatggagcccgacgaggcccgccggcgtcccgagttctacaagctc
accccgctctacccgcaggagcgcctgcggctggagaccgagccgcacatcctcaccacc
cgggtcatcgacctggtcatgccgatcggcaagggccagcgcgcgctgatcgtctccccg
cccaaggccggtaagacgatggtgctccaggccctggcgaacgccatcacccggaacaac
ccggagtgccacctgatggtggtgctggtggacgagcgtccggaagaggtcaccgacatg
cagcggtcggtgaagggcgaggtcgtcgcggccacgttcgaccgtccgccgcaggaccac
accacggtcgccgagctcgccatcgagcgggccaagcggctggtcgagctgggtcacgac
gtggtcgtgctgctcgactcggtgacccgcctcggccggtcgtacaacctggcggcgccg
gcctccggccggatcatgtcgggtggtatcgactcgaccgcgctctacccgccgaagcgg
ttcctcggcgcggcgcgcaacatcgagaacggtggctcgctcaccattctcgcgaccgcg
ctggtggagaccgggtcgatgatggacacggtgatcttcgaggagttcaagggcaccggc
aacgccgagctcaagctggaccggaagatcgctgacaagcgcgtcttcccggccgtggac
gtctccgcctccggcacccgtaaggaagagatcctgatgggcaaggaggagctggcgatc
attcacaagctccgcaaggtgctcagctcgctggagtccggcgcggctctggacctcctg
ctggaccggctcaagcagacccggaccaacatcgagttcctgatgcagatcgccaagtcg
acgcctggcgagtaa
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integrated database retrieval system