Actinoplanes ianthinogenes: Aiant_34560
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Entry
Aiant_34560 CDS
T07429
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03420
Nucleotide excision repair
aih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aiant_34560
03430 Mismatch repair
Aiant_34560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_34560
Enzymes [BR:
aih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aiant_34560
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aiant_34560
MMR (mismatch excision repair)
Other MMR factors
Aiant_34560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCJ42799
LinkDB
All DBs
Position
complement(3821230..3823371)
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AA seq
713 aa
AA seq
DB search
MRTESVLAGLDPDQRTAVTAPAGPVCILAGAGTGKTRAITHRIAHRTLSGEINPRHVLAV
TFTARAAAEMRARLTALGAGAVQARTFHAAALRQVRYFSARLLEGRGMPELMESKIRVVG
LAAARAGVRADRAIARDLASEIEWAKSSLVEPSEYAVAAAKALREPPFEPARVAEVFAAY
ESLKRRQGVIDFEDLLRAAVWGIEEHGDVADQIRAQYRHFVVDEYQDVNPLQQRLLEAWL
GDRDDLTVVGDASQTIYSFTGATSSYLIDFPRRWRGAVVVRLVRDYRSTPQVVGLANAVI
RQARGTEAKLRLELEGQRPSGPEPTLKVFPDEPGEANAVARRCRELIASGTPASEIAVLF
RTNAQSESYEEALAEAQVPYVVRGAERFFERAEVRQAMVALRAAVRSIPGETPLVEAVVE
GLSATGWNRSAPPAGGAAREQWEALAALVTLAEEYAAEPEILPIGDAGRVQRAVTLAAFN
EELARRAEQQHAPTVAGVTLASLHSAKGLEWDAVFLVGLADGTLPTTYAKTADQLEEERR
LLYVGVTRARQLLWLSLGQSRAPGGRARRPCRFLPQLDRAGAGAVRPTGERSQKTDRRPP
KVSSCRVCGATLLAGADRKLGRCPTCPSDMDEDLFQRLQQWRASTAAELKVPAYVVFTDA
TLVAVAERRPTDPAQLLAIAGIGARKLGQYGDAVFALVGGASPDDLGRKNFEN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgcggactgaatcggtgctggccgggctcgacccggatcagcgtacggcggtgacggcc
ccggccggtccggtctgcatcctggccggcgccgggaccggcaagaccagggcgatcacc
caccggatcgcgcaccggaccctctccggcgagatcaacccgcggcacgtgctcgcggtc
accttcaccgcccgggccgccgccgagatgcgcgcccggctcaccgcgctcggcgccggc
gcggtgcaggcccgcaccttccacgccgccgccctgcgccaggtgcgctacttctcggcc
cgcctgctcgagggccggggcatgccggagctgatggagagcaagatccgggtggtcggc
ctggccgccgcccgggccggggtgcgcgccgaccgggcgatcgcccgcgacctggccagt
gagatcgagtgggccaagtcgtccctcgtcgagccgtccgagtacgccgtcgccgccgcc
aaggcgctccgtgagcccccgttcgagccggcccgggtggccgaggtgttcgccgcctac
gagtcgctcaaacgccgtcagggcgtgatcgacttcgaggacctgctgcgcgccgcggtc
tggggcatcgaggagcacggcgacgtcgccgaccagatccgggcgcagtaccggcacttc
gtggtcgacgagtaccaggacgtcaacccgctccagcagcgcctgctggaggcctggctg
ggcgaccgggacgacctcaccgtggtcggcgacgccagccagacgatctattcgttcacc
ggcgccacctcgtcgtacctgatcgacttcccgcgccgctggcggggcgccgtggtggtc
cgcctggtccgtgactaccgctccaccccgcaggtggtcggcctggccaacgcggtgatc
cggcaggcccgcggcaccgaggcgaaactgcggctggagctggaggggcagcgcccgtcc
gggccggagccgacgctcaaggtcttcccggacgagccgggcgaggcgaacgcggtggcc
cgccggtgccgggagctgatcgcgtccggcacgccggccagcgagatcgcggtgctcttc
cggacgaacgcgcagtccgagtcgtacgaggaggcgctcgccgaggcccaggtgccgtac
gtggtccgcggcgccgaacggttcttcgagcgcgccgaggtacgccaggccatggtcgcc
ctgcgcgccgccgtgcggtccatccccggcgagaccccgctggtcgaggcggtcgtcgag
gggctgtccgcgaccggctggaaccgttcggccccaccggccggcggtgccgcccgggag
cagtgggaggcgctcgccgccctggtcaccctcgccgaggagtacgccgcggagccggag
atcctgccgatcggcgacgccggccgggtgcagcgggcggtcaccctcgccgcgttcaac
gaggagctcgcccgtcgcgctgagcagcagcacgcgccgacggtggccggtgtcaccctg
gcctcgctgcactccgccaagggcctggagtgggacgccgtgttcctggtcgggctcgcg
gacgggacgctgcccacgacgtacgcgaaaaccgccgaccagctggaggaggagcgccgc
ctgctgtacgtcggggtgacccgggcccgccagctgctctggctctccctcgggcagtcc
cgggcgccgggcggccgggcccgccggccgtgccgtttcctgccgcagctggaccgggcc
ggcgcgggtgccgtccggccgaccggcgagcggagtcagaaaaccgaccgtcgcccgccg
aaggtgtcctcctgccgggtctgcggggcgaccctgctggccggcgccgaccggaaactg
ggccgctgcccgacctgcccctcggacatggacgaggaccttttccagcgtttgcagcag
tggcgggcgagcaccgccgcggagctgaaagttcctgcttacgtggtgttcaccgatgcc
accctggtcgccgtcgcggaacgccgcccgaccgatcctgcccagttgctggcgatcgcc
ggaataggcgcgcggaagctgggccagtacggcgacgccgtcttcgcgttggtgggcggc
gcgagccccgatgatcttggccgaaaaaactttgaaaactag
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