Actinoplanes ianthinogenes: Aiant_45830
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Entry
Aiant_45830 CDS
T07429
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03030
DNA replication
aih03430
Mismatch repair
aih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aiant_45830 (holB)
03430 Mismatch repair
Aiant_45830 (holB)
03440 Homologous recombination
Aiant_45830 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aih03032
]
Aiant_45830 (holB)
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_45830 (holB)
Enzymes [BR:
aih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aiant_45830 (holB)
DNA replication proteins [BR:
aih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aiant_45830 (holB)
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aiant_45830 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BCJ43926
UniProt:
A0ABN6CG71
LinkDB
All DBs
Position
complement(5032741..5033925)
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AA seq
394 aa
AA seq
DB search
MFSDLVGQDEPVETLRRAAGAAARVVAGEPVASGAMTHAWIFTGPPGAGRSLAARAFAAA
LQCERGGSGCGECHGCHTVLGKTHADVRFVVPEGLSIGVGEMRALVLRAASAPSGGRWQV
VVIEDADRLTEAAGNALLKAIEEPPPRTVFLLCTPSTHPDDISVTIRSRCRLVALRQPPA
DAVAAALVARDAMPSDTAAWAAAAAQGDITRARLLAADSEARSRREAVLAVPKRLTGVGA
CFDVAATLVAAAKAEAAASVAEPDAAERSALEQALGAGGTGRGAAGAMRGAAGQIKDLEK
RQKSRATRAQRDALDRALVDLAGFYRDVLITALRAPVAVVHGDVAAQSQAAAGKWTPEST
LRRLEAVLACRESINQNVKPEIAVEAMMLSLWRG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcggacctggtcgggcaggacgagccggtggagacgctgcggcgggccgccggg
gcggccgcgcgcgtggtggccggggagccggtggccagcggggcgatgacgcatgcctgg
atcttcaccgggccgcccggtgccgggcggtcgctggcggcgcgggcgttcgcggcggct
ttgcagtgtgagcggggcgggagcggctgcggggagtgccacggctgccacacggtgctc
ggcaagacgcacgctgacgtgcggttcgtcgtgccggaggggctgtccatcggcgtcggc
gagatgcgggcgctggtgctgcgggcagccagtgcgccgtccggcgggcggtggcaggtg
gtggtgatcgaggacgccgaccggctcaccgaggcggcgggcaacgcgctgctcaaggcg
atcgaggagccgccgccgcggacggtgttcctgctctgcaccccgtccacccatccggac
gacatctcggtgacgatccggtcccgatgccggctggtggcgctgcgccagccgccggcc
gacgcggttgccgcggcactggtcgcgcgcgacgcgatgccctcggacaccgcggcctgg
gcggccgccgcggcgcagggcgacatcacccgcgcccggctgctcgccgccgactcggag
gcccggtcccggcgcgaggccgtgctggcggtgccgaaacggctgaccggggtcggcgcc
tgcttcgacgtggccgcgacgctggtcgcggcggccaaggccgaggcggccgcgagtgtg
gcggagccggatgccgccgagcgttcggcgctggagcaggcgctcggtgcgggcggcacc
ggccgcggcgcggcgggcgcgatgcgcggcgccgccggccagatcaaggacctggagaaa
aggcagaagtcccgagcgacccgggcccagcgcgatgccctcgaccgggcgctggtcgac
ctggccggtttctaccgcgatgtgctgatcaccgcgctccgcgctccggtcgcggtggtg
cacggcgacgtcgccgcccagtcacaggccgccgccggcaagtggaccccggagagcaca
ctccgtcgcctggaggccgtcctggcctgccgagagtcgatcaaccagaacgtgaaaccc
gagatcgccgtcgaagccatgatgctctccctctggaggggctga
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