Entry |
|
Name |
|
KO |
|
Organism |
aih Actinoplanes ianthinogenes
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:aih00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Aiant_46130
09124 Replication and repair
03420 Nucleotide excision repair
Aiant_46130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:aih03021]
Aiant_46130
03400 DNA repair and recombination proteins [BR:aih03400]
Aiant_46130
Enzymes [BR:aih01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aiant_46130
Transcription machinery [BR:aih03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Aiant_46130
DNA repair and recombination proteins [BR:aih03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Aiant_46130
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(5059404..5061059)
|
AA seq |
551 aa
MNGGPLIVQSDKTLLLEVDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNSRAAG
HDAESVVDALIKFSRYPVPHALLVDVAETMDRYGRLQLLNDPVHGLVLRGLDKIVLLEVS
KSKKLAGMLGARLDDETIAVHGSERGRLKQALLKLGWPAEDLAGYVDGEAHAIALNQDGW
TLRSYQQEAVDGFWAGGSGVVVLPCGAGKTLVGAAAMATASATTLILVTNTVAGRQWKRE
LLARTSLTEEEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGLVIYDEV
HLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTLTEAERMTYAVTDAEERYKVAATARTKLPVVKALVDKHPTEQVLVIGGFLD
QLHTLGDYLDAPIVEGSTTNKERERLFDAFRAGELRTLVLSKVGNFSIDLPEAAVAIQVS
GTFGSRQEEAQRLGRVLRPKGDGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGYAYTIVD
ADDVLGPSLPG |
NT seq |
1656 nt +upstreamnt +downstreamnt
gtgaacggcggaccgctgatcgttcagtcggacaagaccctgctccttgaagtcgatcat
ccggacgcccaggcgtgccggatggcgatcgccccgttcgccgagctggagcgctcgccc
gagcacgtgcacacctaccggctgacgccgctgggcctgtggaactcgcgggccgccggg
cacgacgcggagagcgtggtcgacgccctgatcaagttctcgcggtacccggtgccgcac
gccctgctggtcgacgtcgccgagacgatggaccgctacgggcgcctccagctgctcaac
gatccggtgcacggcctggtcctgcgcggcctcgacaagatcgtgctgctcgaggtgtcg
aaatcgaagaagctggccggcatgctcggcgcgcggctcgacgacgagaccatcgcggtg
cacggctccgagcgcggccggctcaagcaggcactgctcaagctgggctggcccgccgag
gacctggccggttacgtggacggcgaggcgcacgcgatcgcgctcaaccaggacggctgg
accctgcggtcgtaccagcaggaggccgtggacgggttctgggccggtggctccggcgtc
gtcgtgctgccctgtggcgcgggaaagacactggtcggggcggccgcgatggcgaccgcg
tcggccacgaccctgatcctggtgaccaacacggtggccggccgccagtggaagcgggag
ctgctcgcccggaccagcctcaccgaggaggagatcggcgagtacagcggcgagcgcaag
gagatccggccggtcaccatcgcgacctaccaggtgctcacctcccgccgcggcggcgcc
ttcacccacctggacctgttcggcgcccgggactgggggctggtgatctacgacgaggtg
cacctgctgccggcgccgatcttccggttcaccgccgacctccaggcccgccgccggctc
gggctgaccgcgacgctggtccgggaggacggccgggagggcgacgtcttctcgctgatc
ggcccgaaacggtacgacgcgccgtggaaggacatcgaggcgcagggctggatcgccccc
gcggagtgcgtcgaggtgcgggtgacgctgaccgaggcggaacggatgacgtacgcggtg
accgacgccgaggagcgctacaaggtcgccgccaccgcccggaccaagctgcccgtggtg
aaagccctggtcgacaagcaccccaccgagcaggtgctggtcatcggcggcttcctggac
cagctgcacaccctcggcgactatctggacgccccgatcgtcgagggctcgaccacgaac
aaggagcgggagcggctcttcgacgcgttccgcgccggcgagctgcgcaccctggtgctg
tccaaggtcgggaacttctcgatcgacctgcccgaggcggcggtggcgatccaggtctcc
ggcacgttcggctcccggcaggaggaggcgcagcggctcggccgggtgctgcggcccaag
ggtgacgggcggcaggcgcacttctacaccgtggtgtcccgggacaccatcgacaccgag
tacgccgcgcaccggcagcggttcctggccgagcaggggtacgcgtacaccatcgtcgac
gcggacgacgtgctcggcccgtcgctgcccggctag |