Actinoplanes ianthinogenes: Aiant_47470
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Entry
Aiant_47470 CDS
T07429
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aih
Actinoplanes ianthinogenes
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Aiant_47470
Enzymes [BR:
aih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Aiant_47470
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
BCJ44090
LinkDB
All DBs
Position
complement(5211430..5213049)
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AA seq
539 aa
AA seq
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MTPIPTRKRRKLLAGGIATVAVLAGAGLLGGQPWANAAAGITFDTGTGVSFVVDTTNGNM
TSLKHNGIELTAAGQAAGQFESGWSSATVTGQTFNGGNSILVSATNSSIGVTQYYFARKN
DNTIYLATNITKALNPGEARFITRLKSSLLTTSPVAARTAGTTSTVEGSDVFAFANGQTA
SKFYSSQRLITQTPFGASGSGHGAFLIPGTNDMTSGGPFFRDIEVNDTGTAVNITHYMFS
GHQQTEALRLGLHGPYALALTGGAAPVVHSMDFLSAYIPGLLSNAQRGGVSGTVTGNRNG
LTATVGLAGPNGQYWGKVKSGNFVIGHVKPGTYTATLYAGELAIGATKSITVTAGATTTL
AMSGDVPAVGTLFQLGAFDGTPAGFRNSDKIETMHPSDSRMSSWTAGSYSATDAAKFPMA
EFKSVNSPMALTFSLSSVPANGVKLRIGTTSSFAGGRPAVTVGSYSSPASASPAPANLDS
RNVTRGTWRGVNTTYTFTIPASALKTGSNTLSIATISGSSGATFLSPNFIFDALALDPA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacccccatccccactcgcaagcgccggaagctcctcgccggcggcatcgccacggtc
gcggtgctggccggcgccggtctgctcggcggccagccctgggcgaacgccgcggccggc
atcacgttcgacaccgggaccggcgtctcgttcgtggtcgacaccaccaacgggaacatg
acgtcgctcaagcacaacggcatcgagctgaccgccgccggtcaggccgccggacagttc
gagtcgggctggtcgtccgcgacggtcaccggccagacgttcaacggtggcaactcgatc
ctggtcagcgcgaccaactcgtcgatcggcgtgacgcagtactacttcgcgcgcaagaac
gacaacacgatctacctggccacgaacatcaccaaggcgctgaacccgggcgaggcccgg
ttcatcacccggctgaagagctcgctgctgaccacgtcaccggtcgccgcgaggaccgcc
ggcaccacgtcgacggtggagggttcggacgtcttcgcgttcgctaacgggcagaccgcg
tcgaagttctacagctcgcagcggctgatcacgcagacgccgttcggggcgagcggatcc
gggcacggggcgttcctcatccccggcaccaacgacatgacctcgggtggcccgttcttc
cgcgacatcgaggtgaacgacaccggcaccgcggtcaacatcacccactacatgttcagc
gggcaccagcagaccgaggcgctgcggctgggcctgcacggcccgtacgccctggccctc
accggcggcgccgccccggtcgtgcacagcatggacttcctcagcgcgtacattccgggt
ctgctctccaacgcccagcgtggcggcgtgagcggcaccgtgaccggcaaccgcaacggc
ctcaccgcgaccgtcggcctggccggcccgaacggccagtactgggggaaggtgaaatcc
ggaaatttcgtgatcgggcatgtgaagccgggtacctacaccgccacgctctacgccggc
gaactggccatcggcgccaccaagtcgatcacggtgaccgccggcgcgaccaccacgctg
gcgatgtccggtgacgtcccggccgtcggcacgctgttccagctcggcgccttcgacggc
accccggccggtttccgcaactccgacaagatcgagacgatgcacccgtcggacagccgg
atgtcgtcctggacggccggcagctacagcgcgacggacgccgcgaagttcccgatggcc
gagttcaagtcggtgaactcgccgatggcgctgaccttcagcctctcctcggtcccggcc
aacggcgtcaaactgcgcatcggcaccacgtcgagcttcgccggcggccgtcccgcggtc
accgtcggcagctactcgtcgccggcctcggcctcgcccgcaccggccaacctggactcc
cgcaacgtcacccggggcacctggcgcggcgtcaacaccacctacaccttcaccatcccg
gcgagcgcgctcaagaccggcagcaacacgctgtccatcgccacgatcagcggcagcagc
ggcgccacgttcctgagcccgaacttcatcttcgacgccctggccctcgacccggcctga
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