Actinoplanes ianthinogenes: Aiant_48610
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Entry
Aiant_48610 CDS
T07429
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aiant_48610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aih03019
]
Aiant_48610
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_48610
Enzymes [BR:
aih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aiant_48610
Messenger RNA biogenesis [BR:
aih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Aiant_48610
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aiant_48610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
BCJ44204
LinkDB
All DBs
Position
5327398..5329542
Genome browser
AA seq
714 aa
AA seq
DB search
MTETTRNTAGAAERASVRERAEEVLRRLAGEHARLREDQWRAIEALTVDRRRVLCVQRTG
WGKSAVYFVATALLRAAGSTGPTVIVSPLLALMRNQVDAAARAGIRARTINSANLEEWSE
IEQEVRAGTVDVLLISPERLNNPDFRDNVLPGLAHSTGLLVVDEAHCVSDWGHDFRPDYR
RLRTFLGGLPASTPVLATTATANARVTADVADQLGDALVLRGPLDRDSLRLAVLRLPDPA
HRLAWLADHLERLPGSGIVYTLTVAGATEAADFLRSRGFAVATYTGKVEDAERRAAEQDL
LDNKIKALVATSALGMGFDKPDLGFVVHLGAPNSPIAYYQQVGRAGRAVEHAEVVLLPGP
EDAAIWRYFASLAFPPEEQVRAVLTQLSAERPLSTQALEPLVDLRRNRLELLLKVLDVDG
AVRRTRGGWLATGEPWTYDTARLRRVAEARDTEQQTMLEYAVTPTCRMEFLRRCLDDPEA
APCGRCDNCAGPLFDADVSSGSLAAAEAFLGRPGVEVAPKKMWPTGMAAVGISLKGKIGP
AEQIEPGRAVGRLSDLGWGARLRGVVGPDAPDAPIPAELAAAVVEVLKAWARGDDAWSQR
PAGVVAIGSRRHPQLVHSLADHIATIGRLPLLGSLPSTRSGADTFRGNSAQRVRALHDAF
PVPPDLAAAVSAHPGPLLLVDDLVDSGWTMTLAGRVLRRSGADAVLPLALAVAG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagacgacgcgaaacacggccggagcggctgagcgggcgagtgtgcgggagcgc
gccgaggaggtgctgcgccggctcgccggcgagcacgcgagactgcgtgaggatcagtgg
cgcgccatcgaggcgctcaccgtggaccgccggcgggtgctctgcgtgcagcgcaccggc
tggggcaagtcggcggtctacttcgtggccaccgccctgctgcgggccgccggctccacc
ggccccacggtgatcgtgtccccgctgctcgccctgatgcgtaaccaggtggacgcggcc
gcccgggccggcatccgcgcccgcaccatcaactcggcaaatctcgaggagtggtccgag
atcgagcaggaggtccgggccggcacggtcgacgtgctgctgatcagccccgagcggctg
aacaaccccgacttccgcgacaacgtgcttcccggcctggcgcacagcaccggcctgctg
gtggtcgacgaggcgcactgtgtctcggactggggtcacgacttccggccggattatcgg
cgactgcggaccttcctcggtggactcccggccagcaccccggtgctcgccaccaccgcg
accgccaacgcgcgggtcaccgccgacgtcgccgaccagctcggcgacgccctggtgctg
cgcggcccgctggaccgtgactcgctgcgcctcgcggtgctccggctacccgacccggcg
caccggctggcctggctcgccgaccacctcgagcggctgcccggctccggcatcgtctac
acactgaccgtcgccggcgcgaccgaggcggctgacttcctgcgctcccgcgggttcgcc
gtcgcgacctacaccggcaaggtcgaggacgccgagcgccgagccgccgagcaggacctg
ctggacaacaagatcaaggcgctggtggccacctccgcgctcggcatgggcttcgacaag
ccggatctcggcttcgtcgtccacctgggcgcgccgaattcaccgatcgcctattaccag
caggtcggccgggccggccgggccgtcgagcacgccgaggtggtgctgctgcccggcccg
gaggacgcggcgatctggcgttatttcgcctcgctcgccttcccgccggaggagcaggtg
cgggcggtgctgacccagctctccgccgagcggccgctgtccacccaggccctggagccg
ctcgtcgacctgcgtcgcaaccggttggagctgctgctcaaggtgctcgacgtggacggc
gcggtgcgtcgcacgcgcggcggctggctcgccaccggcgagccgtggacctatgacacc
gcccggttgcggcgcgtcgccgaggcccgcgacaccgagcagcaaaccatgcttgagtac
gcagtgacccccacctgccggatggagttcctccgccggtgtctcgacgacccggaggcg
gcgccctgcggccggtgtgacaactgcgccggcccgctcttcgacgccgacgtgtcgtcc
ggttcgctggccgccgccgaggcgttcctcggccggcccggcgtggaggtcgcgccgaaa
aagatgtggcccaccggcatggccgccgtcggcatctcgctgaaaggcaagatcggcccc
gccgagcagatcgagcccggccgggccgtcggccgcctctccgacctgggctggggcgcg
cgcctgcgcggcgtggtcggcccggacgcgccggacgcgccgatcccggccgagctggcc
gccgcggttgtcgaggttctcaaggcctgggcccggggcgacgacgcctggtcccagcgc
ccggccggcgtcgtcgccatcggctcccgccgtcatccacagcttgtccacagcctcgcc
gaccacatcgcaacgatcggccgcctgccgttactcggcagcctgccctcgacccgctcc
ggggcggacaccttccggggcaacagcgcccaacgggtccgcgccctgcacgacgccttc
ccggtcccgcccgacctggccgccgccgtgtccgctcaccccggcccgctgctcctggtc
gacgacctggtcgactccggctggacgatgaccctggcgggccgagtcctccgcaggtcc
ggggccgacgccgtcctcccgctcgccctcgcggtggccggctga
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