| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
aih Actinoplanes ianthinogenes
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:aih00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Aiant_49360 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:aih03021]
Aiant_49360 (rpoC)
03400 DNA repair and recombination proteins [BR:aih03400]
Aiant_49360 (rpoC)
Enzymes [BR:aih01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Aiant_49360 (rpoC)
Transcription machinery [BR:aih03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Aiant_49360 (rpoC)
DNA repair and recombination proteins [BR:aih03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Aiant_49360 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5404891..5408781
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| AA seq |
1296 aa
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAEARHRDMSTIENEIFAEKRQSENGRDSEIEKRAAKLEQD
LAELEAEGAKADVRRKVKEAGEREMRQIRDKAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALLENMDLDAEAENLREIIRTGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPRLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMIIGLYHLTHLTPGAKGEGR
VFSSDAEARMAYDNGELHLQAPVKIRLRDVIGVDNGAKSEAWEAPEEWVEGEPLLVETTL
GRVIFNETLPPGYRYVNYEIRKGQLSAIVNDLAERFPKVALAATLDALKEAGFHWATWSG
VTIGMGDVIGPPRKPEILQRYQVEADRIDKQYQRGLMTAEERRGELIEIWTKATNEISKE
METSLPQENPLWVMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPITSSYREGLTVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMAVGEREADG
TLVVHTHAETGVHARTIADDITDEAGNLVVARGTDLNSILVDKLVAAGVENVRVRSVLTC
ESKLGVCAACYGRSLPTGKSVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQG
LPRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIIVIPDDGSDEIVYDKISKRVKLR
AHDGDHVNVGEKLTEGTIDPHELLRIMGPRAVQVHLTSEVQEVYRSQGVLIHDKHIEIII
RQMLKRVTVIDSGATEFLPGVLVDRALFESENRRLVGEGGEPAAGRPVLMGITKASLATD
SWLSAASFQETTRVLTDAAINSRSDSLVGLKENVIIGKLIPAGTGISKYRNIRVEPTEEA
KAKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR |
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| NT seq |
3891 nt +upstreamnt +downstreamnt
gtgctcgacgtcaacttcttcgacgagttgcgcatcggcctggctaccgctgacgacatc
cggcagtggtcgcacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgacccgctccaaggtccggcgtgagcggatgggtcacatcgagctggccgcctcg
gtcacgcacatctggtacttcaagggtgtgccgagccgcctgggctacctgctcgacctg
gcgcccaaggacctcgagaagatcatctacttcgcttcgtacgtggtcaccagcgtggac
gccgaggcgcgtcaccgcgacatgtcgaccatcgagaacgagatcttcgcggagaagcgg
cagtccgagaacggccgcgactcggagatcgagaagcgtgccgccaagctggagcaggac
ctggccgagctcgaggccgagggtgcgaaggccgacgtgcgccgcaaggtcaaggaagcc
ggcgagcgcgagatgcgccagatccgggacaaggcgcagcgcgagatcgaccgcctggac
gaggtgctcgacaccttccgcaagctcgactccaagcagctggtcaccgacgagctgctc
taccgcgagctgcgggaccgtttcggtgagtacttcaccggcggcatgggcgccgaggcg
atcaaggcgctgctcgagaacatggacctggacgccgaggcggagaaccttcgggagatc
atccgcaccggtaagggccagcggaagatccgggcgctcaagcggctcaaggtcgtggcg
gcgttcctgaacacccgcaactcgccgctcggcatggtgctcgactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgggtcatcaaccggaacaaccgcctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgtcgtggccggccggtcaccggcccgggtaaccgcccgctgaag
tcgctctccgacatgctcaagggcaagcagggccggttccggcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcggctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtcagcgt
ccggtcgtgtgggacgtgctggaggaggtcatcagcgagcacccggtgctgctgaaccgt
gctccgaccctgcaccgtctgggtatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggcggtgcacgtgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctg
tcgtcgaacaacatcctcaagccggccgacggcaagccggtgaccatgcccacccaggac
atgatcatcgggctgtaccacctgacccacctgacgccgggcgcgaagggtgagggccgg
gtgttcagctcggacgccgaggcgcggatggcgtacgacaacggcgagctgcacctgcag
gcgccggtgaagatccgcctgcgcgacgtcatcggcgtggacaacggcgccaagtccgag
gcgtgggaggctccggaggagtgggtcgagggcgagccgctgctcgtcgagaccacgctc
ggccgggtcatcttcaacgagacgctgcccccgggctaccggtacgtcaactacgagatc
cgcaagggtcagctgtcggcgatcgtcaacgacctcgccgagcgcttccccaaggtcgcc
ctggccgcgaccctggacgcgctcaaggaggccggcttccactgggccacctggtccggt
gtgacgatcggcatgggcgacgtcatcggccccccgcgcaagccggagatcctgcagcgc
taccaggtcgaggcggaccggatcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgccgcggcgagctgatcgagatctggaccaaggcgaccaacgagatctccaaggag
atggagacctcgctgccgcaggagaacccgctctgggtcatgatcaactcgggtgctcgc
ggtaacctgctgcagctgcggcagatcgccgcgatccgtggcctggtggccaaccccaag
ggtgagatcatcccgcggccgatcacctcgtcgtaccgcgagggtctgaccgtgctggag
tacttcatctccacccacggtgcccgcaagggtctggccgacaccgcgctgcgtaccgcc
gactcgggttacctgacccggcgtctggtggacgtctcgcaggacgtcatcatccgcgag
gaggactgcggcaccgaccgcgccatcccgatggcggtcggcgagcgcgaggccgacggc
accctggtcgtgcacacccacgccgagaccggcgtgcacgcgcggaccatcgccgacgac
atcacggacgaggccggcaacctggtcgtcgcccggggcaccgacctcaactcgatcctg
gtcgacaagctggtcgccgcgggcgtcgagaacgtccgggtgcgcagcgtgctgacctgc
gagtcgaagctcggtgtgtgcgcggcctgctacggccgttcgctgccgaccggcaagtcg
gtcgacatcggcgaggcggtcggcatcatcgcggcccagtccatcggtgagccgggtacc
cagctgacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggt
ctgccgcgtgtccaggagatcttcgaggcccgggtgccgaagggtaaggcgcccatcgcc
gacacccccggccgcatccggatcgaggacggcgagcggtcgcggaagatcatcgtgatc
ccggacgacggcagcgacgagatcgtgtacgacaagatctcgaagcgggtcaagctgcgg
gcgcacgacggcgaccacgtcaacgtcggcgagaagctcaccgagggcaccatcgacccg
cacgagctgctgcgcatcatgggtccgcgcgcggtccaggtccacctgaccagtgaggtc
caggaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatc
cgccagatgctgaagcgggtgacggtcatcgactccggcgcgaccgagttcctgccgggc
gtgctggtcgaccgggcgctcttcgagtcggagaaccgccggctcgtgggcgagggtggc
gagcccgccgccggtcgtccggtgctgatgggtatcaccaaggcctcgctggcgaccgac
tcctggctctcggcggcctccttccaggagaccacccgggtgctcaccgacgctgcgatc
aactcgcgcagcgactcgctggtgggcctcaaggagaacgtcatcatcggtaagctcatc
ccggccggtaccggtatctccaagtaccggaacatccgggtcgagccgaccgaggaggcc
aaggccaaggtgtactcgatgaccgggtacccggagaccgactacggcttcgggccggcc
agtggccaggccgttccgctggacgacttcgacttcgggtcgtaccgctga |
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