Actinoplanes ianthinogenes: Aiant_49720
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Entry
Aiant_49720 CDS
T07429
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Aiant_49720 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aih03021
]
Aiant_49720 (rpoA)
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_49720 (rpoA)
Enzymes [BR:
aih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Aiant_49720 (rpoA)
Transcription machinery [BR:
aih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Aiant_49720 (rpoA)
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Aiant_49720 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4330
Motif
Other DBs
NCBI-ProteinID:
BCJ44315
LinkDB
All DBs
Position
5430408..5431430
Genome browser
AA seq
340 aa
AA seq
DB search
MLISQRPTLSEESLSETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTIPGVKEDVVELVMNVKELTVSSEHDEPVSMYLRKQGPGDVTAGDIQPPAGVSVHN
PDLKLATLNSKGRLDMELTVERGRGYVTAAQNKSAGAEIGRIPVDSIYSPVLKVTYRVEA
TRVEQRTDFDRLIIDVESKASISPRTALASAGSTLVELFGLCRELDETAEGIDIGPSPQD
AQLAADLALPIEELDLTVRSYNCLKREGINSVGELIGRTEADLLDIRNFGQKSIDEVKMK
LAGMGLGLKDSAPSFDPAHVVDSFGDVDYDTDDYRETEQL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcagccagcggccgaccctctcggaggagtcgctcagcgagacccgctcccgg
ttcaccatcgagcctctggagccgggcttcggctacaccctcggtaactcgctgcggcgg
accctgctgtcgtccatcccgggcgcggcggtcaccagcatcaagatcgacggcgtgctg
cacgagttcaccacgatccccggtgtcaaggaggacgtggtcgagctggtcatgaacgtc
aaggaactgaccgtcagctccgagcacgacgagccggtcagcatgtacctgcgcaagcag
ggcccgggcgacgtgaccgccggggacatccagccgccggccggtgtctccgtgcacaac
cccgatctgaagctggcgacgctgaacagcaagggccggctcgacatggagctgaccgtg
gagcgtggccgtggctacgtcaccgcggcgcagaacaagagcgcgggcgcggagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtcacctaccgtgtcgaggcg
acccgtgtcgagcagcgcaccgacttcgaccgtctgatcatcgacgtcgagtcgaaggcg
tccatctcgccgcggaccgccctggcgtcggccggttccaccctggtcgagctcttcggc
ctgtgccgggagctggacgagaccgccgagggcatcgacatcggcccgtcgccgcaggac
gcgcagctcgctgccgacctggctctcccgatcgaggagctggacctcaccgtccggtcg
tacaactgcctcaagcgggagggcatcaacagcgtcggtgagctgatcgggcgtaccgag
gcggacctcctggacatccggaacttcggccagaagtccatcgacgaggtcaagatgaag
ctcgccggaatgggcctgggcctcaaggacagcgcgccgtccttcgacccggcgcacgtc
gtggactcgttcggcgacgtggactacgacaccgacgactaccgcgagaccgagcagctc
taa
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