Actinoplanes ianthinogenes: Aiant_50500
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Entry
Aiant_50500 CDS
T07429
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03420
Nucleotide excision repair
aih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aiant_50500
03430 Mismatch repair
Aiant_50500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_50500
Enzymes [BR:
aih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aiant_50500
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aiant_50500
MMR (mismatch excision repair)
Other MMR factors
Aiant_50500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCJ44393
UniProt:
A0ABM7LYH8
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All DBs
Position
5516854..5519310
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AA seq
818 aa
AA seq
DB search
MDAPPRCDFLSEGRHTLAPAMRPSSEPSDNALFALPTVAPPAPVVQRAPRPAVDPESLLV
GLNGPQRDAVTHAGGPLLIVAGAGSGKTRVLTHRIAYLLAKRDVHPGEIIAITFTNKAAG
EMKERVAHLVGPRARLMWVSTFHSACVRILRAEHEHAGLKSTFSIYDADDSRRLMQMVAR
ELDLDPKRYTARGLAAQVSNLKNELVDPEEFKQKAKGPNERAVAEAYELYQRRLKEAHAL
DFDDIIMAVVHLFQSHPLVAEAYRRRFRHVLVDEYQDTNHAQYTLIRELVGTEDPSELCV
VGDADQSIYAFRGATIRNILEFERDYPDARTILLEQNYRSTQTILSAANAVIDRNTSRKP
KRLWSDQGAGEQIVGYVADTEHAEADWVAREIDRLSDRHEVRPGDVAVFYRTNNQSRVFE
EVFIRVGLPYKVVGGVRFYERKEVRDALAYLRAIVNEDDTVSVRRVLNTPKRGIGDRAEA
CVEALSNRDRISFGQALRHARNAPGISTRAANSIGDFVQLLDDLRELSVTAPPEEVLESV
LQRSGLLSELEESLDPQDQGRVENLQELVSVAREYTERVEAQEDETATLAGFLEQVALVA
DADQIPTDDPDHQGVVTLMTLHTAKGLEFPVVFLTGLEDGVFPHMRAMSDNAELEEERRL
AYVGITRARQRLYLSRAVTRSAWGQPQYNPPSRFTDELPAELVRWERTGGSYTSWSGTGG
GVGGRGGGDRQRGGGFAGGTPKAQRIAERLGIDASKLATASDLKQTPKVAPGDRVNHQRY
GLGRVVVVEGQGPGARAQIDFGDQVMWLILRHAPIEKI
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccgccacggtgcgatttcctgtcggaggggcggcatacactggctcccgcg
atgcgaccttcttcagaaccttccgacaacgccctgttcgcgctgcccacggtggccccg
ccggcacccgtcgtgcagcgcgcgccgcgtcccgccgtcgacccggagtcgctgctggtg
gggctgaacggcccgcagcgcgacgcggtgacccacgccggtgggccgctgctgatcgtg
gccggtgcgggctcgggcaagacccgggtgctcacccaccggatcgcctacctgctggcc
aagcgggacgtgcatcccggcgagatcatcgcgatcacgttcaccaacaaggcggccggc
gagatgaaggagcgggtggcccacctggtcggcccgcgcgcccggctgatgtgggtgtcg
acgttccactcggcctgcgtccggatcctgcgggccgagcatgagcacgccgggctgaaa
agcaccttctccatctacgacgcggacgactcccgccgcctgatgcagatggtggcccgg
gagctggacctggacccgaagcggtacaccgcccgcggcctcgccgcccaggtgtcgaac
ctgaagaacgagctggtcgacccggaggagttcaagcagaaggccaagggccccaacgag
cgggccgtcgccgaggcctacgagctctatcagcgccgcctcaaggaggcgcacgcgctg
gacttcgacgacatcatcatggccgtggtgcacctgttccagtcgcacccgctggtcgcc
gaggcctaccgccgccggttccggcacgtcctggtcgacgagtaccaggacaccaaccac
gcgcagtacacgctgatccgggaactggtcggcaccgaggacccgtcggagctctgcgtc
gtcggtgacgcggaccagtcgatctacgcgttccgcggcgcgacgatccgcaacatcctg
gagttcgagcgcgactacccggacgcccgcaccatcctgctggagcagaactaccgctcc
acccagaccatcctgtccgcggccaacgcggtgatcgaccggaacacctcgcgcaagccc
aaacgtctctggagcgaccagggcgccggcgagcagatcgtcggctacgtggccgacacc
gagcacgccgaggccgactgggtggcgcgggagatcgaccggctgtccgaccggcacgag
gtgcgtcccggcgacgtggccgtcttctatcgcaccaacaaccagtcccgggtgttcgag
gaggtgttcatccgcgtcggcctgccctacaaggtggtcggcggggtgcgcttctacgag
cgcaaggaggtgcgcgacgcgctggcctacctgcgcgcgatcgtgaacgaggacgacacg
gtcagcgtccgccgggtgctgaacacgccgaaacgcgggatcggcgaccgggccgaggcc
tgcgtcgaggcgctgtcgaaccgggaccggatctcgttcggccaggcgctgcggcacgcg
cgcaacgccccgggcatctccacccgggcggcgaacagcatcggcgacttcgtgcagctg
ctcgacgacctgcgggagctgtcggtgaccgccccgccggaggaggtgctggagtcggtg
ttgcagcgctccggcctgctcagcgagctggaggagagcctcgacccgcaggaccagggc
cgggtggagaaccttcaggagctggtcagcgtggcccgggagtacaccgagcgggtggag
gcgcaggaggacgagacggccaccctggccggcttcctcgagcaggtcgcgctggtcgcc
gacgccgaccagatccccaccgacgaccccgaccaccagggcgtggtcaccctgatgacg
ctgcacacggcgaaaggcctggagttcccggtggtcttcctcaccggcctggaggacggt
gtcttcccgcacatgcgggcgatgtccgacaacgccgagctggaggaggagcgccggttg
gcctatgtcgggatcacccgcgcccggcagcggctctacctgtcccgggcggtcacccgg
tccgcctggggccagccgcagtacaacccgccgtcccggttcaccgacgagctgccggcc
gagctggtccgctgggagcggaccggtgggtcgtacacgtcctggtcgggcaccggtggc
ggggtgggcggccgcggtggcggggaccgtcagcgcggcggtggcttcgccgggggcacg
cccaaggcgcagcgcatcgccgagcggctcggcatcgacgccagcaaactggccaccgcc
agcgacctcaagcagacgccgaaagtggcgcccggcgaccgggtcaatcaccagcgatat
gggttgggccgggtggtcgtggtcgaggggcaggggccgggggcccgggcgcagatcgac
ttcggcgatcaggtgatgtggctgatcctgcggcacgccccgatcgaaaagatctag
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