Actinoplanes ianthinogenes: Aiant_55990
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Entry
Aiant_55990 CDS
T07429
Symbol
holA
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03030
DNA replication
aih03430
Mismatch repair
aih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aiant_55990 (holA)
03430 Mismatch repair
Aiant_55990 (holA)
03440 Homologous recombination
Aiant_55990 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aih03032
]
Aiant_55990 (holA)
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_55990 (holA)
Enzymes [BR:
aih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aiant_55990 (holA)
DNA replication proteins [BR:
aih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aiant_55990 (holA)
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aiant_55990 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BCJ44942
LinkDB
All DBs
Position
6125797..6126780
Genome browser
AA seq
327 aa
AA seq
DB search
MSGVNAAPPPSLLLVQGDEELLAARAVTAAVDAARAADPGADVREYEAGQLTPGEIAEML
SPSLFGGRRVLVLRSGQDARKELAAALLAYAKSPDPEVTLIVTHLGGAKGKAFADGLQKA
GATVVPAMKLKGDRDRIAFVREEFRRAGGRCDEAAASALLASVGNDLREIAAACSQLIAD
TDGKVTEAVVARYYKGRAEVSGFTVADAAMVGDLPGALEALRWALHVGVDPVPIADAIAD
GVRTVARVASAGKGNPYQLASTLGMPAWKIQRAQERSRGWTPEGLVDAMRAAADCNAAVK
GGAEDRGYALEQAVFAVAAARRGGGAR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgtgaacgccgcgccaccgccctcgttgctgctcgtccaaggcgacgaggag
ctgctcgccgcccgtgccgtcaccgcggcggtggacgcggcccgagccgccgatccgggc
gcggacgtccgggagtacgaggccggtcagctcaccccgggcgagatcgccgagatgctc
agcccgtcgctgttcggcgggcgccgggtgctggtgctgcgcagcgggcaggacgcacgc
aaggagctcgccgccgccctgctggcctatgcgaaaagtcccgatcccgaggtcaccctg
atcgtgacccatctgggtggggcgaaaggcaaggcgttcgccgacggcttgcagaaagcg
ggcgccaccgtggtgcccgcgatgaagctcaaaggcgaccgggaccggatcgccttcgtg
cgcgaggagttccgccgggccggcggccggtgcgacgaggcggccgcgtccgcgctgctc
gcctcggtcggcaacgacctgcgggagatcgccgcggcctgctcgcagctgatcgccgac
accgacggcaaggtgaccgaggccgtcgtcgcgcgctattacaagggacgcgccgaggtg
agcggtttcaccgtggccgacgcggcgatggtcggcgacctgccgggcgcgctggaggcg
ttgcgctgggcgctgcacgtcggtgtcgacccggtgccgatcgccgacgcgatcgccgac
ggcgtgcggaccgtagcccgggtcgcttcggccggcaagggcaacccctatcagctggcc
agcacgctcggcatgccggcctggaagattcagcgggcgcaggagcgcagccgcggctgg
acgccggaggggctggtcgacgcgatgcgggcggccgccgactgcaacgccgcggtcaag
ggtggcgccgaggaccggggctatgcgctggagcaggccgtcttcgcggtggccgcggcc
cggcggggcgggggcgcccgatga
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