Actinoplanes ianthinogenes: Aiant_72040
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Entry
Aiant_72040 CDS
T07429
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aih
Actinoplanes ianthinogenes
Pathway
aih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aiant_72040 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aih03019
]
Aiant_72040 (recQ_2)
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_72040 (recQ_2)
Enzymes [BR:
aih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aiant_72040 (recQ_2)
Messenger RNA biogenesis [BR:
aih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Aiant_72040 (recQ_2)
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aiant_72040 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
SaeA_1st
Glycos_transf_N
DUF4644
Motif
Other DBs
NCBI-ProteinID:
BCJ46547
UniProt:
A0ABM7M4H9
LinkDB
All DBs
Position
complement(7915499..7917589)
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AA seq
696 aa
AA seq
DB search
MTDAVDALNRVFGYPEFRGQQHEIVEHVIGGGDALVLMPTGGGKSLCYQIPALVRPGTGV
VISPLIALMQDQVDALRTLGVRANFLNSTQDFEERRLVEAEFVGGELDLLYVAPEGLGTA
SVQRLLDRGTISLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPDVPRIALTATATTATR
DEIAARLQLTGARHFTASFDRPNIQYRIVSKNEPKRQLLELLRTEHRGDAGIVYCLSRAS
VEKHAEFLTQNEIPALPYHAGLDPRTRARNQARFLREEGLVMVATIAFGMGIDKPDVRFV
AHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDSSEGDLAFRRNAARH
LEAMLALCETVSCRRAQLLAYFDQEAAAASCGNCDTCLAPPESWDGTVAAQKLLSTVFRL
KKERNQKFGAGQAIDILLGKRTDKVSQFRHDQLSVFGIGTELRDTEWRGVVRQLLAGGYL
AVEGEYSTLVLTDRSTAILRGEATVMMRREIPNQRLRSRTASSSSSSSRTPAVAPADFPA
EAEPLFERLRAWRAATAKDQSVPPYVIFHDKTLRAIAALSPTSMDQLGTVSGVGQSKLTK
FGTDVLAVVRGEDPTAATDPAATDPAAATTGPASATTGPASVTTGPASVTTGAASAAVPA
RAFIGDPYNGHLDDDQPDDDLFPPPEEPYDYYDGPE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgccgtcgacgcgctcaaccgcgtgttcggctatccggagttccgcggccag
cagcacgagatcgtcgagcacgtgatcggcggtggtgacgccctggtgctgatgccgacc
ggcggcggcaagtcgctgtgctatcagattcccgcgctggtccggcccggcaccggcgtg
gtgatctccccactgatcgctctgatgcaggaccaggtcgacgccctgcgcaccctgggc
gtccgggcgaacttcttgaattcgacgcaggacttcgaggagcgccgcctggtcgaggcc
gagttcgtcggcggcgagctcgacctgctctatgtggcgcccgagggcctcggcacggca
agcgtgcagcgactgctcgaccggggcacgatctcgctgttcgcgatcgacgaggcgcac
tgcgtggcgcagtggggccacgacttccggccggactatctggccctgtcgatgttgcac
gagcgctggccggacgtgccgcggatcgcgctgaccgccaccgcgaccaccgccacccgc
gacgagatcgccgcccggctccagctcaccggcgcgcggcacttcaccgccagcttcgac
cgccccaacatccagtatcggatcgtgtcgaaaaacgagccgaaacggcagctcctggag
ctgctgcggaccgagcaccggggcgacgccggcatcgtctactgcctgtcccgtgcctcg
gtggagaaacacgccgagttcctcacgcagaacgagattcccgcgctgccctatcacgcc
ggcctggacccgcggacccgggcgcgcaaccaggcccggttcctccgcgaggagggcctg
gtgatggtcgcgacgatcgcgttcgggatgggcatcgacaagccggacgtgcggttcgtc
gcccacctggacctgcccaagtcggtggagggttattaccaggagaccggccgggccggc
cgggacgggctgccgtcgacggcctggctggcctatgggctccaggacgtggtccagcag
cgcaagatgatcgacagctcggagggcgacctcgcgttccgccgcaacgcggcccggcac
ctggaggcgatgctcgcgctgtgcgagacggtctcctgccgccgcgctcagttgctggcg
tatttcgatcaggaggccgcggccgcgtcctgcgggaactgtgacacctgcctggccccg
cccgagtcctgggacggcacggtcgccgcgcagaaactgctgtccacggtcttccggctg
aagaaggagcggaaccagaagttcggcgccgggcaggccatcgacatcctgctgggcaag
cgcaccgacaaggtgtcccagttccgccacgaccagctgtcggtcttcggcatcggcacc
gagctgcgcgacaccgagtggcgcggggtggtccggcagctgctggccgggggttacctg
gccgtcgagggtgagtacagcaccctggtcctcaccgaccgcagcaccgccatcctccgc
ggcgaggcgaccgtgatgatgcgccgcgagatcccgaaccagcgcctccgctcccgcacg
gcctcgtcgtcctcgtcctcgtcgcgcacgcccgccgtggccccggccgacttccccgcc
gaggcggagccactcttcgaacgcctccgggcctggcgcgccgcgaccgcgaaggatcag
agcgtcccgccctacgtgatcttccacgacaagacgctgcgcgccatcgccgccctgtcc
cccacgtcgatggaccagctgggcaccgtcagcggcgtgggccagagcaaactgaccaag
ttcggcaccgacgtcctggccgtggtccgcggcgaagacccgaccgcggccaccgaccct
gcggccaccgaccctgccgcggcgaccaccggccctgcctccgcgaccaccggccctgcc
tccgtgaccaccggccctgcctccgtgaccaccggcgctgcctccgccgccgtcccggcc
agggccttcatcggcgatccgtataacggccacctcgacgacgatcagcccgacgacgac
ttgttcccgccgcccgaggagccctacgactactacgacggccccgagtag
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