Actinoplanes ianthinogenes: Aiant_76620
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Entry
Aiant_76620 CDS
T07429
Symbol
topA_2
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aih
Actinoplanes ianthinogenes
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aih03032
]
Aiant_76620 (topA_2)
03400 DNA repair and recombination proteins [BR:
aih03400
]
Aiant_76620 (topA_2)
Enzymes [BR:
aih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Aiant_76620 (topA_2)
DNA replication proteins [BR:
aih03032
]
Prokaryotic type
DNA Topoisomerases
Aiant_76620 (topA_2)
DNA repair and recombination proteins [BR:
aih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Aiant_76620 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BCJ47005
LinkDB
All DBs
Position
8412734..8413723
Genome browser
AA seq
329 aa
AA seq
DB search
MTKRLRRSVLKKPGLSRRRSGRGFRYLDPDGVAVTDPETLRRIKELVIPPAWEDVWICPD
PRGHIQATGLDAAGRKQYRYHEDWRTARDEAKFDRVREVAGRLPKIRDRLCEDLTTGRGL
TRDRVLAAIVRLLDLGMFRVGGDASASREEDPSYGLSTLRPDHVLRRRGELMLKFPGKSG
VEHSRVVEDGEVAQVLDALKRRRRGQERLFAYWNPSTRTWQEIRADAVNDYLREISGAPM
TAKDFRTWHGTVTAAAELAEAGPQPTKTKRRKVVARAMREVADKLGNTPAVARASYVDPR
LLERYEKGEAPRRGDEREVRRLLGDSATS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacggttgcggcgcagcgtactgaagaagcctggtctcagccggcggcggtcc
gggcgcgggtttcgctacctggacccggacggggttgcggtgacggatccggagacgctg
cgccggatcaaggagctggtcatcccgccggcctgggaggacgtctggatctgcccggac
ccgcgcgggcacatccaggcgaccgggctcgacgcggccgggcgcaagcagtaccgctac
cacgaggactggcgcacggcccgcgacgaggcgaagttcgatcgggtgcgggaggtcgcc
ggccgcctgccgaagatccgcgaccggttgtgcgaggacctgacgaccggtcgcgggctg
acccgggatcgggtcctcgccgccatcgtccgactgctcgacctgggcatgttccgggtc
ggcggggacgcctcggcgagccgggaggaggacccgtcctacgggctgtcgacgttgcgt
cccgatcacgtcctccggcgccgcggcgagctgatgctgaaattcccgggtaagtcgggc
gtcgagcactcgcgggtggtcgaggacggggaggtcgcccaggtgctcgacgcgctcaag
cgtcgccggcgtgggcaggagcggctgttcgcctactggaacccgtccacgcggacctgg
caggagatccgcgccgacgcggtcaacgactacctgcgggagatcagcggcgccccgatg
accgcgaaggacttccgcacctggcacggcaccgtgacggccgccgcggaactcgccgag
gcgggcccgcaacccacgaagaccaagcgccgcaaggtcgtcgcgcgggccatgcgcgag
gtcgccgacaaactcggcaacactccggcggtggcccgggcgtcgtacgtcgacccgcgc
ctgctggagcggtacgagaagggcgaggcgccccgccgcggcgacgagcgcgaggtccgc
cgcctactcggcgactcggccacgtcctga
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