Actinoplanes ianthinogenes: Aiant_79130
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Entry
Aiant_79130 CDS
T07429
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
aih
Actinoplanes ianthinogenes
Brite
KEGG Orthology (KO) [BR:
aih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aih03021
]
Aiant_79130
Transcription machinery [BR:
aih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Aiant_79130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
STAS_2
Sigma70_r4_2
STAS
KORA
Sigma70_ECF
DUF937
Motif
Other DBs
NCBI-ProteinID:
BCJ47256
LinkDB
All DBs
Position
8665044..8666213
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AA seq
389 aa
AA seq
DB search
MSVDQRSTGLGSTGSGSAGREDLDAVAAAWNQARQGCARDRRQRLRDEMIAAAMPLATRL
ARRFRSRSESLADLEQVARLGLVKAVDRFDPGRGSFTAYAVNTMLGELKRHLRDHSWGVH
VPRRMQDAVRELTGHQAALERELGREPTDAQLARRAGIDPGDLDRIRVSAAAYQPVSLNS
PVGAGDSELLDLFGELDQAVENAADRLTTADLLARLPERERHIVSAIFFDGQVQTQVAAE
MGISQMQVSRALARALAWLREGLLTDLVPRWPATAEAPFEVRATLLPGRELEIVVVGEVD
RDNAGLLRTALLDLIRNQPPGQRVVLRLRRVPLLDAAGIRVLLAVYQAACARGVLVTATG
VNPLVRRLATGAGLGPMINPPRTNPRPAR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgaccaacgcagcaccggcctcggcagcaccggctccggcagcgcgggccgg
gaggatctcgacgctgtcgcggccgcctggaaccaggcgcggcaggggtgtgcccgggac
cggcggcagcgcttgcgggacgagatgatcgcggcggcgatgcccctggccacgcggctg
gccaggcggttccggtcacggtccgagtcactcgcggatctggagcaggtggcgcgactg
ggcctggtcaaggcggtggaccggttcgacccgggacgcgggtcgttcacggcgtacgcc
gtcaacaccatgctgggcgagctgaaacggcacctgcgggaccactcctggggagtgcac
gtgccccggcgcatgcaggacgcggtccgcgagctgaccgggcaccaggcggcgctggag
cgggagctgggccgggagcccaccgacgcgcagctggcgcggcgggccgggatcgacccg
ggcgacctggaccggatccgggtgtcggcggccgcctaccagccggtgtcgctgaactcg
ccggtcggcgcgggcgactccgaactcctggacctgttcggcgagctggaccaggcggtg
gagaacgccgcggaccggctcaccaccgccgacctgctggcccgcctgccggagcgggaa
cgccacatcgtgtccgcgatcttcttcgacggccaggtgcagacccaggtcgccgcggag
atgggcatctcgcagatgcaggtgtcgcgcgcgctggcccgcgcactggcctggctgcgc
gagggcctgctgaccgacctggtgccgcgctggccggcgaccgccgaggcgccgttcgag
gtgcgggccacgctgctgccgggccgcgagctggagatcgtcgtggtgggcgaggtcgat
cgggacaacgccgggttgttgcggacggcgctgctcgacctgatccgcaaccagcctccc
gggcagcgggtcgtgctgcggttgcgccgggtgccgctgctcgacgccgcagggatccgg
gtgctgctcgcggtctaccaggccgcctgcgcccgcggtgtgctggtcaccgcgaccggc
gtgaacccgctggtccgccggctggcgaccggcgccggtctgggccccatgatcaacccg
ccgcggacgaaccctcggccagctcgctga
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