KEGG   Actinoplanes ianthinogenes: Aiant_80700
Entry
Aiant_80700       CDS       T07429                                 
Name
(GenBank) hypothetical protein
  KO
K03090  RNA polymerase sigma-B factor
Organism
aih  Actinoplanes ianthinogenes
Brite
KEGG Orthology (KO) [BR:aih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aih03021]
    Aiant_80700
Transcription machinery [BR:aih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Aiant_80700
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 HTH_3 HTH_23 MarR DUF134 HTH_10 HTH_31 MarR_2 NirdL-like_HTH Sigma70_ECF DUF7343 HTH_24 HTH_37 TetR_C_11 LacI HTH_AraC GerE HTH_Tnp_4 KORA
Other DBs
NCBI-ProteinID: BCJ47413
LinkDB
Position
8835966..8836748
AA seq 260 aa
MTVLVETDAATSADQASELIAALAALPAGHPSRAGLRDRVIEAWLPLARHLSNRYANRGE
PRDDLYQVAVMGLIKAVDRFEADRGVDFAGFAIPTVIGELKRHFRDKTWSVRVPRRLQEL
RLAITTANNALTHDLGRSPTVADIAEYLNVTEDEVIEGLEGARAYNSTSLSTPMSDSGTE
LGDTLGGMDAGFEEAELRVALGPAMASLDEREQKIISLRFYGNLTQSQIAEQVGVSQMHV
SRLLTRALAKLRDQLAGADI
NT seq 783 nt   +upstreamnt  +downstreamnt
atgaccgtcctggttgagaccgacgccgcgacgagtgcggaccaggccagcgaactgatc
gccgcgttggcggcactgccggccggacatccgtcgcgggccgggctgcgggatcgggtg
atcgaggcgtggctgccgctggcgcggcacctgtccaaccggtacgccaaccggggcgag
ccgcgcgacgacctgtaccaggtcgcggtgatggggctgatcaaggcggtcgaccggttc
gaggcggaccggggcgtcgacttcgccgggttcgccatccccaccgtgatcggtgagctg
aagcggcacttccgggacaagacctggtcggtgcgggtaccccggcggctccaggagctg
cggctggcgatcaccacggcgaacaacgcgctgacccacgacctgggccgctcgccgacg
gtggcggacatcgccgagtacctgaacgtcaccgaggacgaggtgatcgagggtctggag
ggcgcccgggcctacaactcgaccagcctgtccacgccgatgagcgacagcggcaccgag
ctgggcgacacgctcggcgggatggacgccgggttcgaggaggccgagctgcgggtcgcg
ctcggcccggcgatggccagcctggacgagcgcgagcagaagatcatcagcctgcggttt
tacggcaacctaacccagtcgcagatcgccgagcaggtcggcgtctcgcagatgcacgtg
tcgcggctgctcacgcgggcgctggcgaagctgcgtgatcagctcgccggtgcggacatc
tga

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