Allofrancisella inopinata: E4K63_00050
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Entry
E4K63_00050 CDS
T06698
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aii
Allofrancisella inopinata
Brite
KEGG Orthology (KO) [BR:
aii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aii03016
]
E4K63_00050
Enzymes [BR:
aii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E4K63_00050
Transfer RNA biogenesis [BR:
aii03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E4K63_00050
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QIV95316
UniProt:
A0AAE6YGR6
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All DBs
Position
14395..16251
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AA seq
618 aa
AA seq
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MQKNSLVIFKSKPAKVVDVLDKKIEIETLDGKKIKLPPKNVQFLIDTQNDFELAELKQLQ
IDDLELTWELLQEQTETSIEELSELFFENTGVNQVYTIWLLVSEGEFFSFNEDFSINIHS
PAQKEAITREKQERQKKEQELNNFIERLNNKTYLQDDEKSLKEIEALALLKSPNCRFFKH
LNMEESENSAYKLLLDIGYWDEYNNPHLYRYKAELEDNPAEFEYNFSSDVSRLDLTHLKA
YAIDDEDSNDPDDAISWDAKNSKIWVHVADPSSSIAFGEQVDLEARARGSNLYTPEKIIS
MLPAKATEILGLGLQEISPALSIGFNVTDNGDIENIQICFSKIKVTRLSYEFAEENISSL
DLGYIPKFAKSFTEKRLQSGGVELDFPEAKIKLEADKKVSIYDLHKLGSRTLVRDTMLMA
GVAVGKFCLEHSIAVPFSTQPQHGLTKEELESLLTPADMFAARKKLQRGQYTTQADKHAG
MGLENYVQVTSPLRRYLDLLVHYQIRRFLGHQELLSIDTVNEIIAQVDTPIRINRQTERD
SNLHWKLVYLIQNPNMKFKATVVELLERNRVLVSIEKLAMTKKISVNSKLDLNSTLVLEN
SSVNLVNQEAYFKVLENR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatagcttagttatctttaagtctaaaccagctaaggttgtagatgtttta
gacaaaaaaatagaaatagaaaccttagatggcaaaaaaataaaattaccacctaaaaat
gtccaattcctaatagatacacaaaacgattttgagttagcagagttaaaacaactacaa
attgatgatcttgagttaacttgggagcttttgcaagagcaaacagaaacctcaatagag
gagttaagtgaactgttttttgaaaatactggagttaaccaggtatatacaatttggctt
ttagtgtcagaaggagagttttttagctttaatgaggattttagtataaacatacattct
cctgcacaaaaagaagcaataactcgagaaaaacaggaaagacaaaaaaaagaacaagag
cttaataattttatagagcgtctaaataataaaacgtatttgcaagatgatgaaaaatcc
ctaaaagagattgaagctttagcgttattaaaaagcccaaactgtagattctttaagcac
cttaacatggaagaatcagagaatagcgcatataagttacttctagatattggctattgg
gatgaatacaataacccacatttatatagatataaagcagagctagaggataatcctgca
gagtttgaatataattttagttctgatgttagtaggttggatttaacccatctaaaagct
tatgctatcgatgatgaggatagcaacgaccctgatgatgctataagctgggatgctaaa
aatagtaaaatatgggtacatgttgctgatccatcttcaagtattgcttttggtgagcaa
gtagatttagaagctagagctagaggttcaaatttgtatactcctgagaaaattatttca
atgcttccagcgaaagctacagaaattttaggattaggactacaagaaatatctccagcc
ttatctataggttttaatgttactgataatggtgatatcgagaatatacaaatatgcttt
agtaaaattaaagtaactagactaagttatgaatttgcagaagaaaatataagtagtctt
gaccttggatatattcccaaatttgcaaaaagttttacagaaaaacgcttacaatcagga
ggtgttgagttagattttccagaagctaaaattaaactagaagctgataaaaaagttagc
atatatgatttacacaaattaggctcgcggactttagtaagagatactatgcttatggca
ggtgtcgcggtaggtaaattttgtctagaacatagcatagctgttcctttttctacacag
ccacagcatgggctgactaaagaagagttagaatctctgctaacgccagcagatatgttt
gctgcgaggaaaaagttacaaagagggcagtatactacacaagctgataaacatgctggt
atgggtttagaaaactatgtacaagtaactagtcctttaagaagatatcttgatttgtta
gttcactatcagattagacgttttttaggtcatcaagaattattaagtattgatactgta
aatgaaattatagcacaagtagatactccaataagaataaacagacaaactgaaagagat
tcaaatctacattggaagctagtatatctaatacaaaaccctaatatgaaattcaaagct
acagttgtagagttactagagagaaacagagtattagtatctatagagaaactagctatg
acaaagaaaatatctgtcaatagtaaactagatctaaatagcactttagttttagaaaat
agctcagtaaaccttgtaaatcaggaagcttattttaaggttctagaaaatagataa
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