Allofrancisella inopinata: E4K63_01160
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Entry
E4K63_01160 CDS
T06698
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aii
Allofrancisella inopinata
Pathway
aii03030
DNA replication
aii03410
Base excision repair
aii03420
Nucleotide excision repair
aii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E4K63_01160 (polA)
03410 Base excision repair
E4K63_01160 (polA)
03420 Nucleotide excision repair
E4K63_01160 (polA)
03440 Homologous recombination
E4K63_01160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aii03032
]
E4K63_01160 (polA)
03400 DNA repair and recombination proteins [BR:
aii03400
]
E4K63_01160 (polA)
Enzymes [BR:
aii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E4K63_01160 (polA)
DNA replication proteins [BR:
aii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E4K63_01160 (polA)
DNA repair and recombination proteins [BR:
aii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E4K63_01160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4K63_01160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QIV95519
UniProt:
A0AAE7CQN2
LinkDB
All DBs
Position
259277..261955
Genome browser
AA seq
892 aa
AA seq
DB search
MKKIVLVDGSSYLFRAFHALPKLTNSQGEPTGAILGVINMIKKLPVMYQTEYVAVVFDPK
GKSFRHEIYPEYKANRKAMDDELRVQIKPLHEIIKKMGFPLIIKENVEADDVIGTLAKQL
EAQGYQVVISTGDKDMAQLVSENIMLYDSMKDAITDIPKVLEKYQVEPSQIIDYLALMGD
SSDNIPGIPKVGPKTAVKWLQEYKNIENIIINKDKIAGKVGENLRDNIDLLRLSYQLATI
KRDLDLNIPINEIKCKEMDKEALHEFFVRYEFKSLLKALDIGVETVERKTVNINYKTVFT
DKELEDLVKTLETKEGFAFDTETDSLDTYEANLVGLSFCAEEGQAYYIPLQHRYLGVPQQ
LELKTVLESLKPIFSNIKKFKVAHNFKFDEKVLSKYGVDIQGSVHDTMIMSYVLKSSGKH
DMDSISKEYLGVEPIPYGAIAGTGRNQQTLDQVEIDKVAKYAAEDADITFRLYKFLKVLL
EKEETLNKLYFEIEMPLTLILNQMEKLGVKINADKLIRHSQELESSIRELEKKCFELCGQ
EFNLSSPVQLREVLFEKMGLPAVKKTAKGQASTSEEVLTQLAQEYEVADLIMKYRHLCKL
KNTYTDKLPAMLDKNSRVHTSYNQTGTVTGRLSSSDPNLQNIPIKSTEGRKIREAFIAEE
GNYIVAADYSQIELRIMAHLSKDENLLKAFRQGLDIHRATAAEVLGISIADVTSEQRRRA
KAVNFGLIYGMSAFGLAKQLEISRNEAQEYIEIYFSRYPGIKEYMNTAKKVAQESGYVET
ILGRRLYLPEINARNVMQRNAAERAAINAPMQGTAADIIKKAMIDVNTKLIQEYSKDVKM
IMQVHDELVFEVTKDKMDDVCKQIKGIMEQAVMLSVPLEVNVGFGDNWDQAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagtcttggttgatggttcgtcatatttgtttagagcctttcacgcgcta
ccaaagcttactaatagtcaaggtgagcctacaggggcgatcttgggtgtcatcaatatg
attaaaaagctaccagtaatgtatcaaacagaatacgttgccgtagtgtttgatcctaaa
ggtaagagttttcgtcacgaaatttacccagaatataaggcaaaccgtaaggctatggat
gacgaattaagagttcaaatcaagcctttacatgaaataatcaaaaaaatgggttttcct
cttattatcaaagaaaacgttgaagcagatgatgtgataggtactctagcaaaacagctt
gaagctcagggctatcaagtggttatatctacgggtgataaagatatggctcagctggta
agtgaaaatataatgttatatgactcaatgaaagacgctataacagatattcccaaagtt
ttagaaaagtatcaagttgaacctagccagattatagattatttagctttaatgggagat
tcttcagataatattcctggtattccaaaagttggtccaaaaacagcggttaagtggtta
caagagtataaaaatattgagaacattataataaacaaggataaaatagcaggcaaagtt
ggtgagaatttgcgtgacaatattgatcttcttaggttatcttaccaattagctactata
aagcgtgatcttgatctgaatattcctataaatgagataaaatgtaaagaaatggataaa
gaagctttacatgaattttttgtaaggtatgaatttaaatctcttctaaaagctctagat
attggtgtagaaactgttgaaagaaaaaccgtaaatattaattataagacggtttttaca
gataaagagttagaagatttggtgaaaactttagaaactaaagaaggttttgcgtttgat
actgaaacagattcattagatacttacgaagcaaacctggtagggctttctttttgtgct
gaagaaggccaagcatattatatccctttacaacatagatatcttggagtgccgcaacag
cttgagttaaaaactgtattggagtccctaaaaccaatattttctaacataaagaagttt
aaagttgctcataattttaagtttgatgaaaaagttttatcaaaatatggagtcgatatt
caaggaagtgttcatgatactatgattatgtcttatgtactaaaaagtagtggtaagcat
gatatggatagtatctccaaagagtatcttggtgtagagcctattccttatggtgcaata
gctgggactggtagaaaccagcaaactttagaccaagtggaaatcgacaaagtagctaag
tacgccgctgaagatgcagatattactttcaggttatataagtttctaaaagttttatta
gaaaaagaagagacacttaataagctgtattttgaaatagaaatgccattgaccctaatt
ttaaatcaaatggaaaagctaggcgtcaagataaatgctgataagttaattagacatagc
caagaattagagagtagtataagagagctagaaaaaaagtgttttgagttgtgtggacaa
gagtttaatttatcttctccagtgcaattaagagaagtactatttgaaaaaatggggttg
ccagcagttaaaaaaacagcaaaaggtcaagcttcaacctctgaagaggtgcttacacaa
ttagctcaagaatatgaagtggctgatttaattatgaaatatcgtcatctttgcaagtta
aaaaatacttatactgataagttgccagctatgcttgataagaattcaagagtacatacc
tcatataatcaaacgggtactgtaacaggtagattatcttcatctgaccctaatttacag
aatattccgattaaaagcactgagggtagaaaaataagagaagcctttatagcagaagag
ggtaattatatagttgcagcagactactcacagatagagcttaggattatggcacattta
tccaaagatgaaaaccttcttaaagcttttaggcagggcttggatatacaccgtgcaacg
gctgcagaggttttgggcataagcatagctgatgtaacaagtgagcaaagaagaagagca
aaagctgtaaattttggtttgatttatgggatgagtgcgtttggattggcgaaacagcta
gaaatttctagaaatgaggctcaagagtatatagaaatatatttcagtcgctacccgggg
atcaaagaatatatgaacactgcaaaaaaagttgctcaagaaagtggctatgtagagact
atattaggaagaaggttgtatttaccagagataaacgcgagaaacgttatgcaacgtaac
gctgctgaaagagctgctattaacgcaccaatgcaaggtacagcagcagacattattaaa
aaagcaatgatagatgttaatactaagcttatacaagaatacagtaaagacgttaaaatg
ataatgcaggttcacgatgagcttgtatttgaagttacaaaagataagatggatgatgtc
tgcaagcagataaaaggtataatggagcaagctgtcatgcttagcgtgccacttgaggta
aacgtaggatttggcgataactgggatcaagcacactag
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