KEGG   Allofrancisella inopinata: E4K63_01160
Entry
E4K63_01160       CDS       T06698                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
aii  Allofrancisella inopinata
Pathway
aii03030  DNA replication
aii03410  Base excision repair
aii03420  Nucleotide excision repair
aii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E4K63_01160 (polA)
   03410 Base excision repair
    E4K63_01160 (polA)
   03420 Nucleotide excision repair
    E4K63_01160 (polA)
   03440 Homologous recombination
    E4K63_01160 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aii03032]
    E4K63_01160 (polA)
   03400 DNA repair and recombination proteins [BR:aii03400]
    E4K63_01160 (polA)
Enzymes [BR:aii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E4K63_01160 (polA)
DNA replication proteins [BR:aii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     E4K63_01160 (polA)
DNA repair and recombination proteins [BR:aii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     E4K63_01160 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E4K63_01160 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 NYN_YacP HHH_2
Other DBs
NCBI-ProteinID: QIV95519
UniProt: A0AAE7CQN2
LinkDB
Position
259277..261955
AA seq 892 aa
MKKIVLVDGSSYLFRAFHALPKLTNSQGEPTGAILGVINMIKKLPVMYQTEYVAVVFDPK
GKSFRHEIYPEYKANRKAMDDELRVQIKPLHEIIKKMGFPLIIKENVEADDVIGTLAKQL
EAQGYQVVISTGDKDMAQLVSENIMLYDSMKDAITDIPKVLEKYQVEPSQIIDYLALMGD
SSDNIPGIPKVGPKTAVKWLQEYKNIENIIINKDKIAGKVGENLRDNIDLLRLSYQLATI
KRDLDLNIPINEIKCKEMDKEALHEFFVRYEFKSLLKALDIGVETVERKTVNINYKTVFT
DKELEDLVKTLETKEGFAFDTETDSLDTYEANLVGLSFCAEEGQAYYIPLQHRYLGVPQQ
LELKTVLESLKPIFSNIKKFKVAHNFKFDEKVLSKYGVDIQGSVHDTMIMSYVLKSSGKH
DMDSISKEYLGVEPIPYGAIAGTGRNQQTLDQVEIDKVAKYAAEDADITFRLYKFLKVLL
EKEETLNKLYFEIEMPLTLILNQMEKLGVKINADKLIRHSQELESSIRELEKKCFELCGQ
EFNLSSPVQLREVLFEKMGLPAVKKTAKGQASTSEEVLTQLAQEYEVADLIMKYRHLCKL
KNTYTDKLPAMLDKNSRVHTSYNQTGTVTGRLSSSDPNLQNIPIKSTEGRKIREAFIAEE
GNYIVAADYSQIELRIMAHLSKDENLLKAFRQGLDIHRATAAEVLGISIADVTSEQRRRA
KAVNFGLIYGMSAFGLAKQLEISRNEAQEYIEIYFSRYPGIKEYMNTAKKVAQESGYVET
ILGRRLYLPEINARNVMQRNAAERAAINAPMQGTAADIIKKAMIDVNTKLIQEYSKDVKM
IMQVHDELVFEVTKDKMDDVCKQIKGIMEQAVMLSVPLEVNVGFGDNWDQAH
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgaaaaaaatagtcttggttgatggttcgtcatatttgtttagagcctttcacgcgcta
ccaaagcttactaatagtcaaggtgagcctacaggggcgatcttgggtgtcatcaatatg
attaaaaagctaccagtaatgtatcaaacagaatacgttgccgtagtgtttgatcctaaa
ggtaagagttttcgtcacgaaatttacccagaatataaggcaaaccgtaaggctatggat
gacgaattaagagttcaaatcaagcctttacatgaaataatcaaaaaaatgggttttcct
cttattatcaaagaaaacgttgaagcagatgatgtgataggtactctagcaaaacagctt
gaagctcagggctatcaagtggttatatctacgggtgataaagatatggctcagctggta
agtgaaaatataatgttatatgactcaatgaaagacgctataacagatattcccaaagtt
ttagaaaagtatcaagttgaacctagccagattatagattatttagctttaatgggagat
tcttcagataatattcctggtattccaaaagttggtccaaaaacagcggttaagtggtta
caagagtataaaaatattgagaacattataataaacaaggataaaatagcaggcaaagtt
ggtgagaatttgcgtgacaatattgatcttcttaggttatcttaccaattagctactata
aagcgtgatcttgatctgaatattcctataaatgagataaaatgtaaagaaatggataaa
gaagctttacatgaattttttgtaaggtatgaatttaaatctcttctaaaagctctagat
attggtgtagaaactgttgaaagaaaaaccgtaaatattaattataagacggtttttaca
gataaagagttagaagatttggtgaaaactttagaaactaaagaaggttttgcgtttgat
actgaaacagattcattagatacttacgaagcaaacctggtagggctttctttttgtgct
gaagaaggccaagcatattatatccctttacaacatagatatcttggagtgccgcaacag
cttgagttaaaaactgtattggagtccctaaaaccaatattttctaacataaagaagttt
aaagttgctcataattttaagtttgatgaaaaagttttatcaaaatatggagtcgatatt
caaggaagtgttcatgatactatgattatgtcttatgtactaaaaagtagtggtaagcat
gatatggatagtatctccaaagagtatcttggtgtagagcctattccttatggtgcaata
gctgggactggtagaaaccagcaaactttagaccaagtggaaatcgacaaagtagctaag
tacgccgctgaagatgcagatattactttcaggttatataagtttctaaaagttttatta
gaaaaagaagagacacttaataagctgtattttgaaatagaaatgccattgaccctaatt
ttaaatcaaatggaaaagctaggcgtcaagataaatgctgataagttaattagacatagc
caagaattagagagtagtataagagagctagaaaaaaagtgttttgagttgtgtggacaa
gagtttaatttatcttctccagtgcaattaagagaagtactatttgaaaaaatggggttg
ccagcagttaaaaaaacagcaaaaggtcaagcttcaacctctgaagaggtgcttacacaa
ttagctcaagaatatgaagtggctgatttaattatgaaatatcgtcatctttgcaagtta
aaaaatacttatactgataagttgccagctatgcttgataagaattcaagagtacatacc
tcatataatcaaacgggtactgtaacaggtagattatcttcatctgaccctaatttacag
aatattccgattaaaagcactgagggtagaaaaataagagaagcctttatagcagaagag
ggtaattatatagttgcagcagactactcacagatagagcttaggattatggcacattta
tccaaagatgaaaaccttcttaaagcttttaggcagggcttggatatacaccgtgcaacg
gctgcagaggttttgggcataagcatagctgatgtaacaagtgagcaaagaagaagagca
aaagctgtaaattttggtttgatttatgggatgagtgcgtttggattggcgaaacagcta
gaaatttctagaaatgaggctcaagagtatatagaaatatatttcagtcgctacccgggg
atcaaagaatatatgaacactgcaaaaaaagttgctcaagaaagtggctatgtagagact
atattaggaagaaggttgtatttaccagagataaacgcgagaaacgttatgcaacgtaac
gctgctgaaagagctgctattaacgcaccaatgcaaggtacagcagcagacattattaaa
aaagcaatgatagatgttaatactaagcttatacaagaatacagtaaagacgttaaaatg
ataatgcaggttcacgatgagcttgtatttgaagttacaaaagataagatggatgatgtc
tgcaagcagataaaaggtataatggagcaagctgtcatgcttagcgtgccacttgaggta
aacgtaggatttggcgataactgggatcaagcacactag

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