Allofrancisella inopinata: E4K63_01210
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Entry
E4K63_01210 CDS
T06698
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aii
Allofrancisella inopinata
Pathway
aii03420
Nucleotide excision repair
aii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4K63_01210 (uvrD)
03430 Mismatch repair
E4K63_01210 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aii03400
]
E4K63_01210 (uvrD)
Enzymes [BR:
aii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4K63_01210 (uvrD)
DNA repair and recombination proteins [BR:
aii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4K63_01210 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E4K63_01210 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DUF4252
Motif
Other DBs
NCBI-ProteinID:
QIV95529
UniProt:
A0AAE6YIU2
LinkDB
All DBs
Position
272514..274733
Genome browser
AA seq
739 aa
AA seq
DB search
MSLKDSLGSLNPQQHKAVLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGIAVDNILAV
TFTNKAAKEIQQRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQEEQA
QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDQATRSSKLSRQYDANFNSIYEAYEERLQL
DNALDFADLLLYLYELFSLNIQLREYYQNLFKYILIDEFQDTNHVQYLWLKLLLTDDNYI
MAVGDDDQSIYGWRGAIVDNIHSYVKEVNNVEIIKLEQNYRSTKNILKAANSVIKNNNNR
MSKELWSAAEEGEKIQVYNAVNEREEAKYIIDKIRKLHQDGENYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEVKDALAYLRLAVTSTDNLAYERIINTPARGIGNKTL
DTIRNFAHINLLSYWQATLEVIQKELVTKRTASLLLNFIQLIDDIANQIKELSLDKLLEY
VITKSGLLASYEEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNADILQDFLSLAVLE
AGEMQADESVDSIQLMTIHAAKGLEFKHVFIVAAEEGVFPPNAVINSQEAFDNSHSKKLQ
EKLAEERRLFYVAITRAMVSLTISYAQVRNIFGRSSFQVCSRFLSEIDEEHLSQEQNQQS
KAKVRAKSNFGVSPFDFLKSSSSNNKTFKPGEKVFHKIFGKGIFIKSQAQGTKEFYTVNF
GPDVGQKILLADIANLVKI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaaagattccttgggtagcttaaacccacagcagcataaagctgtactactt
gaagatcgtaactcgcttattttagcgggcgctggtagtggtaaaactaaagttcttact
tcaaggatagcttatctatgccgtgataagggtatagctgttgacaacattttagctgtt
acatttacaaataaagctgctaaggagattcagcagcgtgttgaaaaaatgcttggaatc
tcgacatttgggatgtggatagggacttttcatggcatagcccataggttgctacgtaag
catgcacatgaacttggtttagataaaaactttagaattcttgatcaagaagagcaagct
caacttataaaaaaagtgataaaatctttagatcttgatgataaaaaatatcctccaaaa
ttacttcaaaactttataaataaacaaaaagatcaagcaacaaggagcagtaaactttct
agacaatatgatgcaaactttaacagtatttatgaggcttatgaagagaggttgcaactt
gataatgctttagattttgcagatttattactctatttgtatgagctgttttctttaaat
attcaactaagagaatattaccaaaatttatttaaatatatacttatagatgagtttcaa
gatactaaccatgtacagtatctttggttaaagcttttgctaactgatgataattatatt
atggctgttggcgatgatgatcaatcaatatatggttggcgaggagctatagtggataac
atccatagttatgtaaaagaagtaaacaacgttgagataatcaagttagagcaaaattac
cgatcaacaaaaaatattcttaaggcagcaaattctgtcatcaaaaataataataacaga
atgtcaaaagaactttggtctgctgctgaagagggcgaaaaaatacaagtatacaacgct
gtaaatgaaagagaagaagccaaatatataattgataaaatccgtaaacttcaccaagat
ggtgaaaattatagtgatattgcaatattgtaccgctctaactatttgtctcgtgtacta
gaagaaagttgtatatatgctagtattccatataggatttacggtggctttagattcttt
gatagagcagaggttaaagatgctttggcttacctaagattagcagttacaagtacagat
aacttagcttatgaacgtatcattaacactccagcacgtgggataggtaacaaaacttta
gatacaattagaaattttgctcatattaacttattatcatattggcaagcaaccttagaa
gttattcaaaaagagttagtaacaaaacgtacagcaagtttgcttttaaattttatccaa
ttaattgacgatatagctaatcaaataaaagagcttagcttagataagttactggagtac
gtgattacaaaaagtgggcttttagcttcttatgaggagaaagatacagaaaaagatcgt
caaaaaatagataatttaaaagaattaataagtgcagctaaggactttgaaccacaaatt
gagttgcttgatgataacgctgatattttacaagattttttatccttagcagttttagaa
gctggtgaaatgcaggctgatgaatcagtagatagtatacaattgatgactattcatgcg
gcaaaaggcctagagtttaagcatgtatttatagttgctgcagaagagggtgttttccct
ccaaatgctgttattaatagtcaggaagctttcgataattctcattcaaaaaaacttcaa
gaaaaacttgctgaagaaaggagacttttttacgttgcaattactagggctatggtatct
ttaactattagttacgcccaggtacgtaatatttttggtagaagtagtttccaggtttgt
tctaggtttttatctgagattgacgaggaacacttaagccaagagcaaaatcaacaatca
aaagctaaagtaagagcaaaatctaactttggcgtttcgccatttgattttttaaaatca
agttcctctaataataaaactttcaaacctggagaaaaagtttttcataaaatctttggt
aaaggtatttttattaaatcacaagctcaaggtacaaaagagttctatacggtaaatttt
ggtcctgacgttggacaaaagattctattggcagatattgctaatctagttaagatatag
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