Allofrancisella inopinata: E4K63_06190
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Entry
E4K63_06190 CDS
T06698
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aii
Allofrancisella inopinata
Pathway
aii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E4K63_06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aii03021
]
E4K63_06190
03400 DNA repair and recombination proteins [BR:
aii03400
]
E4K63_06190
Enzymes [BR:
aii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E4K63_06190
Transcription machinery [BR:
aii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E4K63_06190
DNA repair and recombination proteins [BR:
aii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E4K63_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QIV96438
UniProt:
A0AAE7CS73
LinkDB
All DBs
Position
complement(1351521..1352477)
Genome browser
AA seq
318 aa
AA seq
DB search
MAIENLLHPTNIKINDYGKNATKFSFEALDRGAGYTLGFALKQTMLYSIGGACITSIKIN
DGKVTSLEDIIPCEETVADIILNVKALAVTLADNVDTGTIIFDLSGSAEEIFSQEAKLTE
GLTINEDVFICSYIGGKKLKIEAKVEKGVGYRPALESFKDGEFLLDATFSPVTFCEFEVK
NARVGRRTDLDSLGFDIKTNGNITSQDALRLAAAKIQSQLVNVVNVDEINQGVFVEDPTK
NIDPLLLKHVEELNLTARSSNCLKAVNIRYIGELVQKTETELLKAPNFGKKSLNEIKDKL
VELDLSLGTIINNWPEGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctatagaaaatttactacaccctactaatattaagataaatgactacggtaaaaat
gcaactaaattctcttttgaagcgttagatagaggtgctggttatactctcggttttgcc
ttaaagcagactatgctttactctattggcggggcgtgtattactagtatcaaaattaac
gatggtaaagttacttctttggaagatataattccatgtgaagaaactgttgctgatatt
atcctaaatgttaaagctcttgctgtaacattagctgataatgtagatacaggaactatt
atttttgatttatcaggttctgctgaagagattttttctcaagaagctaaattaactgaa
ggtttgactataaatgaagatgtgtttatttgtagctacataggtggtaaaaaacttaaa
atagaagctaaagttgaaaagggcgttggctatagaccagcattagaaagtttcaaagat
ggtgaatttttgctagatgctactttttcaccagtcactttttgtgagtttgaagttaaa
aacgcccgcgttggcagacgtacagatcttgatagtttaggttttgatattaaaactaat
ggtaatataacttctcaagatgctttaagactagcagctgctaagattcaaagccaatta
gttaatgtggttaatgttgatgaaataaaccaaggtgtttttgtagaagaccctactaaa
aatattgatcctttattgttaaagcacgttgaagagttgaatctaacagcaagatcctca
aactgtttaaaagcagtaaatattagatatataggtgaacttgtacaaaaaacagaaaca
gagttactaaaagcaccaaattttggtaaaaaatctttaaatgaaatcaaagataaattg
gtagaattggatttatctttaggtactatcataaataattggccagaaggtttataa
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