Agromyces intestinalis: FLP10_08665
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Entry
FLP10_08665 CDS
T09895
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ail
Agromyces intestinalis
Pathway
ail03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ail00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLP10_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ail03019
]
FLP10_08665
03400 DNA repair and recombination proteins [BR:
ail03400
]
FLP10_08665
Enzymes [BR:
ail01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FLP10_08665
Messenger RNA biogenesis [BR:
ail03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FLP10_08665
DNA repair and recombination proteins [BR:
ail03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FLP10_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DprA_WH
HTH_Cmi2_C
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QEO14481
UniProt:
A0A5C1YED2
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All DBs
Position
1893615..1895708
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AA seq
697 aa
AA seq
DB search
MTDATTDTRAAALTALRALVGRDDAEFHDGQFEAISALVDEHRRALVVQRTGWGKSAVYF
VATLLLRRAGAGPTVLVSPLLALMRDQVAAAERAGVRAVSINSTNPHEWADVLARLDADE
VDVLLVSPERLNNPSFREQQLPALVRRIGLLVVDEAHCISDWGHDFRPDYRRLRELIAQL
PAGVPVLATTATANSRVVTDVAEQLGGADVLTIRGPLARASLRLGVLQLPNSPSRLAWLI
SHLDDLPGSGIIYTLTVAAAIDTARVLRERGHEVRAYTGQTDSDERTESEGMLKRNEVKA
LVATSALGMGFDKPDLGFVLHLGAPSSPVAYYQQVGRAGRATDSADVLLLPGVEDRDIWH
YFATASMPDEDRAGRVLAALSDQPTSTAALEAMVDLRRTPLELLLKVLDVDGAVRRVQGG
WVSTGEPWVYDAERYRRIAAERLAEQQHMLDYETTEMCRMEFLQRSLDDETAAPCGRCDN
CAGTWYPTGIADDATRAAASALDRVGVPIEPRKMWPTGADRLGVPVKGRIAPGQQAAEGR
ALARLTDLGWGGALREVFAAGTPDAPVPPRLLDACVRVLADWGWAERPVAVVAMPSTSHP
QLVDSLACGLAEIGRLPYVGALALRDGGPTGQPGGNSAYRLAGVWNRFDADALDVPSGPV
LLVDDVADSRWTLTVAARELRIAGATDVLPFALALRG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccacgaccgacacccgtgcggccgccctcaccgcgctgcgcgcactcgtc
gggcgcgacgacgccgagttccacgacggtcagttcgaggcgatctcggcactcgtcgac
gagcaccgtcgggcactcgtcgtgcagcgcaccggctggggcaagtcggcggtctacttc
gtggcaacgctgctgctgcgccgggcgggtgccggcccgacggtgctggtgtcgccgctc
ctcgccctgatgcgcgaccaggtcgccgcggccgagcgggccggcgtgcgcgccgtctcg
atcaactccaccaacccgcacgagtgggccgacgtgctcgcccgcctcgacgccgacgaa
gtcgatgtgctgctcgtctcgcccgagcggctcaacaatccgtcgttccgcgagcagcag
ctaccggcgctcgtgcgccgcatcgggctgctcgtcgtcgacgaggcgcactgcatcagc
gactgggggcacgacttccggcccgactaccgccggctgcgcgagctcatcgcgcaactg
ccggccggcgtgcccgtgctcgcgaccaccgcgacggcgaacagccgagtcgtcaccgat
gtcgccgagcagttgggcggcgccgacgtactcaccatccgcggcccgctggcccgcgcg
tcgctgcggctcggggtgctgcagctgccgaactcgccgagtcggctcgcgtggctcatc
agccacctcgacgacctgcccgggtcgggcatcatctacacgctcacggtcgcggcggcg
atcgacaccgcgcgggtgctgcgcgagcgcggtcacgaggtgcgcgcctacacgggtcag
accgactccgacgagcgcaccgagtccgagggcatgctgaagcgcaacgaggtcaaggcg
ctcgtggcgacgagcgcgctcggcatggggttcgacaagcccgacctcgggttcgtgctg
cacctcggcgcgccgtcctcgccggtcgcgtactaccagcaggtgggtcgtgccggccgg
gcgaccgacagcgccgacgtgctgctgctgccgggcgtcgaagaccgcgacatctggcac
tacttcgccaccgcgtcgatgcccgacgaagaccgcgccggccgcgtgctcgccgcgctc
tccgaccaacccacctcgacggccgccctcgaggcgatggtcgaccttcgccgcactccg
ctcgagttgctgttgaaggtgctcgatgtcgacggcgccgtgcgtcgggtgcagggcggc
tgggtctcgaccggcgagccgtgggtctacgacgccgagcgctaccggcgcatcgctgcc
gagcgcctcgccgagcagcagcacatgctcgattacgagaccaccgagatgtgccgcatg
gagttcctgcagcgctccctcgacgacgagacggcggcgccctgcgggcgctgcgacaac
tgcgccggcacctggtatcccaccggcatcgccgacgacgcgacccgcgctgccgcgtcg
gccctcgatcgcgtcggcgtgccgatcgagccgcgcaagatgtggcccacgggcgccgac
cgcctcggcgtgccggtgaaggggcgcatcgcgccgggccagcaggccgccgagggtcgg
gcgctcgcccggctcaccgacctcggctggggcggcgcgctgcgcgaggtgttcgccgcc
ggcacgcccgacgccccggtgccgccccggctgctcgacgcgtgcgtgcgggtgctcgcc
gactgggggtgggccgaacgaccggtcgcggtcgtcgcgatgccgtcgacgtcgcacccg
cagctcgtcgactccctcgcctgcgggctcgccgagatcgggcggctcccgtacgtcggc
gcgctcgcgctccgcgacggcggcccgaccggccaacccggcggcaacagcgcctaccgg
ctcgccggcgtctggaatcggttcgacgccgacgcactcgacgtgccatccgggcctgta
ttgctcgtcgacgacgtcgccgacagccggtggacgctcaccgtcgccgcccgcgagctc
cgcatcgcgggcgcgaccgacgtgctgccgttcgcgctggcgctgcgcgggtga
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