Agromyces intestinalis: FLP10_13470
Help
Entry
FLP10_13470 CDS
T09895
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ail
Agromyces intestinalis
Pathway
ail03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ail00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FLP10_13470
09124 Replication and repair
03420 Nucleotide excision repair
FLP10_13470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ail03021
]
FLP10_13470
03400 DNA repair and recombination proteins [BR:
ail03400
]
FLP10_13470
Enzymes [BR:
ail01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FLP10_13470
Transcription machinery [BR:
ail03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FLP10_13470
DNA repair and recombination proteins [BR:
ail03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FLP10_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QEO15323
UniProt:
A0A5C1YH93
LinkDB
All DBs
Position
complement(2964522..2966168)
Genome browser
AA seq
548 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVANPLAEDARHDLAIFAELERAPEHIHTYRITRLGLWNARAAG
HTAEDMLGTLEKYAKFPVPQTVAVDMRETVARYGRLVIDRTDDGALRLQSSDIAVLTEVS
GAKRIAPLLGERIDDESFLVAPWARGALKQELVKLGWPAEDLAGYTPGTPHEIDLDETGW
HLRDYQQKAVDNFFDGGSGVVVLPCGAGKTLVGAGAMATAKTTTLILVTNTVSARQWRDE
LLRRTSLTEEEIGEYSGQVKEIRPVTIATYQILTAKRKGEYAHLSLLDALDWGLIVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AACYEVRIDLPQSERLQYAASADDERYRLAATAPAKLDVVRQLVARHEGERILVIGQYLD
QIDELAEALDAPQLTGSTPVDERERLYQEFRDGRTKVLVVSKVANFSVDLPEATVAIQVS
GSFGSRQEEAQRLGRLLRPKESGLSANFYTLVARDTVDQDFAQNRQRFLAEQGYSYTILD
AHTLDAAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggccccctcatcgtgcagagcgatcgcaccgtgctcctcgaggtcgcgaac
ccgctcgccgaggatgcgcgccacgacctcgcgatcttcgccgagctcgaacgcgcaccc
gagcacatccacacgtaccgcatcacccgcctcgggttgtggaacgcccgcgccgcgggc
cataccgcggaagacatgctcggcacgctcgagaagtacgcgaagttcccggtgccccag
accgtcgccgtcgacatgcgcgaaaccgtcgcccgctacggccggctcgtgatcgaccgc
accgacgacggtgcgctgcgcctgcagagctccgacatcgcggtgctcaccgaggtgtcg
ggcgcgaagcgcatcgcccccctgctcggcgagcgcatcgacgacgagagcttcctggtc
gccccgtgggcgcggggcgccctcaagcaggaactggtgaagctcggctggcccgccgaa
gacctcgccggctacacccccggaactccgcacgagatcgacctcgacgagacgggctgg
cacctgcgcgactaccagcagaaggccgtcgacaacttcttcgacggcgggtcgggcgtg
gtcgtactgccgtgcggcgcgggcaagaccctcgtcggcgccggcgccatggcgaccgcg
aagaccacgacgctcatcctcgtgaccaataccgtgtcggcccgccagtggcgcgacgaa
ctgctgcgccgcacctcgctcaccgaggaggagatcggcgagtactcgggccaggtgaag
gagatcaggcccgtcacgattgcgacgtaccagatcctcaccgcgaagcggaagggcgag
tacgcgcatctgtcgctgctcgacgcgctcgactggggcctcatcgtgtacgacgaggtg
cacctgctgccggcgcccgtgttcaagctcaccgccgagctgcaggcgcgccgccgcctc
ggcctcaccgcgacgctcgtgcgcgaggacggccgtgagggcgacgtgttctcgctcatc
ggccccaagcgattcgacgccccgtggaaggagatcgaggcgcagggcttcatctcgccc
gccgcctgctacgaggtgcgcatcgacctgccgcagtccgagcggctgcagtacgcggca
tccgccgacgacgagcgctaccggctcgcggcgaccgcacccgcgaagctcgacgtcgtg
cgccagctcgtggcgcgccacgagggcgagcgcatcctcgtgatcggccagtacctcgac
cagatcgacgagctcgccgaggccctcgacgcgccgcagctcaccggctcgacgcccgtc
gacgagcgtgagcggctctaccaggagttccgcgacggccgcacgaaggtgctggtcgtc
tcgaaggtcgcgaacttctcggtcgacttgcccgaggcgaccgtggcgatccaggtgtcg
ggctcgttcggctctcgacaggaggaggcgcagcgcctcggacgcctgctgcgccccaag
gagtcgggcctgtcggcgaacttctacacgctcgtcgcacgcgacacggtcgaccaggac
ttcgcgcagaaccggcagcggttcctcgccgagcagggttactcgtacacgatcctcgac
gcgcacacactcgacgcggcggcctga
DBGET
integrated database retrieval system
