Amygdalobacter indicium: PYS61_00880
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Entry
PYS61_00880 CDS
T09413
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10558
AI-2 transport system ATP-binding protein
Organism
aim
Amygdalobacter indicium
Pathway
aim02010
ABC transporters
aim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PYS61_00880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PYS61_00880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aim02000
]
PYS61_00880
Transporters [BR:
aim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
PYS61_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
Mg_chelatase
AAA_22
AAA_30
MukB
TsaE
AAA_19
AAA_15
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WEG35747
LinkDB
All DBs
Position
complement(212217..213764)
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AA seq
515 aa
AA seq
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MRNMEAEKSDQIILEVKGVVKSFGSNKVLKGIDLSAQKGKVLALIGGNGAGKSTLMKIIM
GLYKADLGEVKVNGRTVNISSAGDSLATGIYMVPQEPLLFPHMTILENILIGIKGNRKEL
NRRVDELLHKYKWSINLNSLAEGLSVAKQQIVELMRALIRDANVLILDEPTGALTFDEVE
TLYSIIDELKRNGKAIIYITHRLGEIFRIADTIDIMRDGVITVSGKVADFTEKDLIKGLL
PDNPENKVQEQNLTAFGNSEEDADNSADEEIYRQKPVLELQNYTGYGFSDINLKIYPGEI
LGVAGVVGAGRTELAIGIFGLEKAVSGKCLLENRDITNLSTKEILLAGINYVTEDRSVNG
LFKIRSVLNNLCSSFLLLEKKKGVFVDEQAEKELTDYYVRKFRIKISSQEQEVGDLSGGN
QQKIMIARALSTKPKLVILDEPTRGIDAGARADIYRIIGELRKAGVAVMLISSDMEEIVA
LSTRAVVICQGRILETLQRTEITPEKLMAASFGVK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacatggaagctgaaaaaagcgaccaaattattttggaagtcaaaggagtagtt
aaatctttcggtagcaacaaagtgctgaagggaattgatctgtccgctcaaaaaggcaaa
gtgttggctttgatcggcggcaacggagcaggtaaatctactctgatgaagataataatg
ggtttatacaaggctgacttgggtgaagttaaggttaacggacgaactgttaatatttct
tcagccggagattctttggcaacgggtatttatatggttccgcaggaaccgttgctcttt
ccgcatatgactatattggaaaatatacttataggcatcaaaggtaaccggaaagaactg
aaccgccgcgtcgatgaacttttacataaatataagtggtcgattaatttgaattctttg
gcggaagggttatctgtggccaaacaacagattgttgaattgatgcgggctttgattcgg
gacgctaatgtactgattttagatgaacctaccggagctttaacttttgatgaagtcgaa
acgctatattcgataattgacgaactgaagcgcaatggaaaagctattatttatattacc
catcgtctgggagaaatattccgtattgccgatactattgacattatgcgtgacggagtc
attactgtttccggtaaggtcgccgattttactgaaaaagatcttataaagggacttttg
cctgataatccggagaataaggtgcaggaacaaaatttaaccgctttcggtaatagcgaa
gaagatgcggataactcggcagatgaagagatttatcgccaaaagcctgttttggaactt
caaaattatacgggctacggcttttcagatatcaaccttaaaatttatcccggcgaaata
ttaggcgttgcgggcgttgtaggcgcaggtcgcactgaacttgcaatcggtatattcggc
ctggaaaaagcggtttccggcaagtgccttttagagaatagagatattacgaatttatcc
actaaagagatattgctggcaggaattaattatgttactgaagaccgcagcgtcaacggc
ctattcaaaataagatcggtgcttaataacttgtgctcctcttttcttttgctggaaaaa
aagaagggtgtttttgttgatgaacaggcggagaaagagttaaccgattattatgtccga
aaattcagaattaaaatcagctcgcaggagcaggaagttggagacttatcaggcggtaat
caacaaaagattatgattgcacgtgcgttatcgactaaaccgaaattggttattttggat
gaaccgacaagaggtattgatgccggagcacgggcggatatatatcgaataatcggggaa
ttacgcaaagcgggcgtagctgtgatgcttatatcctccgatatggaagaaattgttgct
ttatcgaccagagcggtagttatttgccaagggagaattctggaaactttgcagcgcacg
gaaataactccggaaaaattaatggctgcatcattcggtgttaagtag
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