Amygdalobacter indicium: PYS61_03860
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Entry
PYS61_03860 CDS
T09413
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aim
Amygdalobacter indicium
Pathway
aim03420
Nucleotide excision repair
aim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PYS61_03860
03430 Mismatch repair
PYS61_03860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aim03400
]
PYS61_03860
Enzymes [BR:
aim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYS61_03860
DNA repair and recombination proteins [BR:
aim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PYS61_03860
MMR (mismatch excision repair)
Other MMR factors
PYS61_03860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
TACC_C
Motif
Other DBs
NCBI-ProteinID:
WEG35086
LinkDB
All DBs
Position
921623..924217
Genome browser
AA seq
864 aa
AA seq
DB search
MENTSTIYNDLNAAQKEAVLYGEGPLLILAGAGSGKTRVVTYRISHLIKDLQVMPQQIMA
LTFTNKAALEMKERVSKLIGSNVDRMWIGTFHSVMVKVLRQFGSLLHYSPSFQILDTEEQ
QKLIKTILQEQGLDKDMYDPRAVIQAISKQKGRLLTVEQFYEKYPTLTKCLDSTAKLCFP
FYAEYQKRLLSLNAMDFDDLLLNAYVLFVNYPHVLELYANRFRYIFVDEYQDTNFAQYNL
VHMLSSKHRNLCVVGDDDQSIYAFRGADVRIILSFEEDFPDAKVIKLEQNYRSSATILQA
ANNIIKHNRKRKAKELWTTAASGDKITYYRALNQQDEADYVVETIKKSVQQGQEYRQFAV
LYRVNALSRNLELAFLKAQIPFHIFGGLRFYERKEIKDVLAYLRLICDPKDDLAFIRVVN
TPKRQIGTSTVEKVLTLARTSGKSALEICAEVSRYPELQKAQNKLATFARLVADMRRNLQ
NPAFTLASYIEYVQNESGLVEEILNQMEKGREDSAQRVENLKEMLSDAVDFVKQAKFDTL
DFTDEQLEENDLLAFVSRERKAITDLSTAPVKTYDGKAADLSLLEQEALKRTTESDSEAE
SLRQRTLLDDLHDYLEMTVLNQAVEGENDGNFVTLMTLHAAKGLEFDNVFIVGMEESIFP
GVRSLNNIESLEEERRLAYVGVTRAKKKLTLTATAERLLYGSTTYNPQSRFVKEIPPELL
DEKQNETSTDNYDLFQHNDRRHYGSAGSFSFGNYQADNYNSNKNTVAYSQRVINKGVQEA
MSQLHKISNNKKTEIKLTPLAVGKSTNELELAQLKVNMRVVHARLGHGVIKQIEPVANDA
IVVIQLDNGESKRIMAKAAHLQRE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacaagcacaatttataatgatttgaatgccgcccaaaaagaggcggtactt
tacggtgaaggaccgcttttgattttggcaggagcaggttcaggcaaaacacgggtagtt
acttatcgtatcagccatttaattaaagatttacaggtaatgccgcaacaaattatggct
ttaacttttaccaacaaagcggcgttggaaatgaaagaacgtgtaagtaaattaatcggc
agtaacgtcgaccgtatgtggataggtacattccattccgtgatggttaaagttttgcgc
cagttcggctcgctcttgcactacagcccgagttttcagattttggataccgaagaacag
caaaaactgattaaaacaattttgcaggaacagggtttggacaaagacatgtatgacccg
cgggcggttattcaggctatatccaaacaaaaaggtcgtttgttgacggtggagcaattt
tacgagaaatatccgacattgacgaaatgtttggacagtacagctaagctgtgtttcccg
ttttatgcggaatatcagaaaagattattaagtctcaatgcgatggattttgatgatttg
ctgctcaacgcttatgttctgtttgtgaattatccccatgttttggaactttacgctaat
cgtttccgctatatttttgttgatgagtatcaggataccaattttgctcagtacaacctt
gttcatatgctgagttccaagcatcgcaatttatgtgtggtcggggatgatgatcagtct
atttacgcttttcgaggtgcagatgtccgaattattctgagttttgaggaagattttccg
gatgcgaaagtaattaaattggaacagaattatcgctccagtgccactattttacaggct
gcaaataatattattaaacataaccggaagcgtaaggccaaagaattgtggactacggcg
gcgtcaggcgacaaaattacgtattatcgagctttgaaccaacaggatgaagctgattat
gttgttgaaactatcaaaaaatcggtgcagcagggacaggaatacagacaatttgctgtc
ttataccgtgttaacgctttatcgcgtaatttagagttggccttcctgaaagcgcagata
cctttccatatattcggcggcttacgcttttatgagcgcaaagaaatcaaagatgttttg
gcttatttgcgtttgatttgcgatcctaaagatgatttggctttcattcgggtagttaat
acgcctaaaagacaaataggaacaagtacagttgaaaaagttttaactttggctcgtact
tccggtaaatcggctttagaaatttgtgcggaagtttcccgctatccggaactgcagaaa
gctcagaacaaattggcaacttttgcccggctggtggccgatatgagacgtaatttgcaa
aatcccgcttttactttagcctcttatattgaatatgttcagaatgaaagcggtttagta
gaagagattttgaatcaaatggaaaaaggacgcgaagattcggcgcaacgagtggaaaac
ttgaaagaaatgctttcggatgctgtcgactttgttaaacaagctaagttcgataccttg
gattttaccgatgagcaattggaggagaacgatttgctggcttttgtcagccgcgaaaga
aaagctattacagatttgagtacagcgccggtaaagacttatgacggtaaggccgccgac
ttgtcgttgttggaacaggaagctctgaaaagaacgacagagagtgattccgaggctgaa
agtctaagacagcggactttgttggacgatttacatgattatttggaaatgacggtctta
aatcaggcggtggagggcgaaaatgacgggaatttcgtcactttaatgactttacatgcc
gctaaaggtttggagtttgataacgtttttattgtcgggatggaagaaagtatttttccc
ggtgtaagatcgttgaataatattgaaagtttggaagaagaaagacgtttagcttatgtc
ggagttaccagagctaaaaagaaattaacgttaacagcgacggcggaacgcttactttac
ggtagtactacctataatccgcaatcccgtttcgtaaaggaaataccgcctgaattgttg
gatgaaaagcaaaatgagacgagcaccgataactatgatttatttcagcataatgatcgt
cgtcactatggcagtgccggtagtttcagcttcggcaactaccaagctgacaactataac
agcaacaaaaacacagtcgcttactcgcaacgagtaattaataaaggtgtacaggaggct
atgagtcaattacacaaaatcagtaacaacaaaaaaactgaaatcaaattgacgccctta
gctgtcggtaaaagcacaaatgaattggagttggcacaattaaaagttaatatgcgagtt
gtgcatgcccgcttgggacatggcgtaattaaacaaatagaaccggttgccaatgatgct
attgtagttatacagttggataacggtgaaagtaagcgcattatggccaaagcggcccat
ctgcagcgggagtag
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