Amygdalobacter indicium: PYS61_04370 Help Entry PYS61_04370       CDS       T09413                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism aim  Amygdalobacter indicium Pathway aim03018   RNA degradation Brite KEGG Orthology (KO) [BR:aim00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PYS61_04370  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aim03019]     PYS61_04370 Messenger RNA biogenesis [BR:aim03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      PYS61_04370 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RMMBL Lactamase_B RNase_J_C Lactamase_B_2 Anti-Pycsar_Apyc1 Choline_kin_N PDEase_II Motif Other DBs NCBI-ProteinID:  WEG35174 UniProt:  A0ABY8C4E4 LinkDB All DBs Position 1042548..1044659 Genome browser AA seq 703 aa AA seqDB search MNKTNSNNVKIPGGKRIRFKTFKPQNNIKPQPIGPVTNKLANENKEKRNGKNLPLIAAKT PVKSSKAPLFAHGSRIRIAKNKLLQKNQIRPYKRTKLKLLYRPNLSPQLEFLKLADSEPK FNTYENRFQRMMSVQTPRSVSKQLPKAPQGALKIIPLGGLCEVGKNLTCYEYENEIIVVD VGVKFPTEDHPGIDSVLPNMQYLYDNKDKIKGIFITHGHEDHIGSIAWLMEKVKAPIFAG PLAIKLIEKKLKERNLTNACRDLHVCHSGETVIAGKFKVEYIHVNHSIADAFSLAIFTPA GTVIHSGDFKVDFTPINGQAIDLQRFAELGKEGVLLYMCESTNATKNGYTMSEKTIGRCF DDYFREAAGRIFVSTFSSNVDRVSQVISAAEAYNRKVCLLGRSMQSVFQAAFDLGYIKIK HNTLIDLKDIHKYKPQELCFIMTGSQGEPLAVLSRVAYSEHPAISIKEGDTIILSSSPIP GNERSVVRVIDELYKHGATVIYNQLNEVHVSGHASREELKLMHSIIKPRYFVPGHGEYHM LYEHAKLAHELGQPWNNIFIMHNGDVLSLKDDFAAITGYVPGNDVLIDGSTRTLANTKVI QERHTLADKGLIDLAFAVNELNGDLLGEAEIKTVGFIFETDKGIEHNFKEVISREIQAAK KSGKPLATFLTSDYFRQKLLAYLHKATGREAEIIISIVPVRLR NT seq 2112 nt NT seq  +upstreamnt  +downstreamnt atgaataaaacaaatagtaacaatgtgaaaataccgggcggcaaacgaatccgcttcaaa acatttaagccgcaaaataatattaaaccgcagccgatcggaccggtgacgaataaattg gcgaacgaaaataaagaaaagcgtaacgggaagaacttgccgctcatagcggccaagact ccggttaaaagcagcaaggcgccgttatttgctcacggcagcagaataagaatagctaaa aacaagttattacaaaagaatcaaattcgcccgtacaaaagaactaaactgaagttgttg tatcggccgaatttatcgccgcagttggagtttttaaaactggctgacagtgaacctaaa tttaacacctatgaaaatcgttttcaaagaatgatgtctgttcagacacctcgttcggtc agtaagcagctgccgaaagcaccgcagggagcgcttaaaattatccctttaggcggtctg tgtgaagtgggtaaaaatttaacatgttatgaatatgagaatgagattatagttgttgat gtcggcgtgaagtttccgacagaggatcatccgggaatagactcggttttgcctaatatg caatatctttacgataataaagataaaatcaaaggtatttttattacccacggacatgaa gatcatataggctcaatcgcctggctgatggaaaaggttaaagcgcctatatttgccggc cctttggctatcaaattaattgagaaaaaattgaaagagcggaacttgactaacgcttgc cgtgatttgcatgtttgccatagcggtgaaactgtaatagccggtaaatttaaggtggaa tatattcatgtcaatcactcaattgcagatgccttctctttggcgattttcactccggcc ggaacagttattcattcaggcgattttaaggtggattttacgccgataaacggacaggca attgatctgcaacgttttgccgaattgggtaaagaaggcgttctactctatatgtgtgag agtacgaatgcgaccaaaaacggttatacgatgtcggagaaaactataggtcggtgcttt gatgattatttccgggaagctgcaggcagaatctttgtttctactttctcgagcaatgtt gatcgggtgtctcaagttatctccgcggccgaagcttataatcgtaaagtttgtctttta ggacgttcgatgcagtccgttttccaagctgcctttgacttgggatatattaaaattaag cataatactttaattgatttaaaagatattcataaatataagccgcaggaactgtgcttc attatgaccggcagtcagggagagcctttagctgttttaagtcgagttgcttattcggag catccggccatcagtatcaaagaaggcgataccattattttgagttcttctcccattccc ggtaatgaacgctcggttgtcagagttattgatgagttgtacaaacacggtgctacggtt atatataatcaattgaatgaagtgcatgtttcggggcatgcttccagagaagagctgaaa ttgatgcacagcattatcaaaccgcgttattttgttccggggcacggcgaataccatatg ctttatgaacatgctaaattagcgcatgaattggggcaaccatggaataatatttttatt atgcataatggtgatgtcctttctttgaaagacgattttgccgctattaccggatatgta ccgggtaatgacgttttgattgacggcagcaccagaactttggctaataccaaagttatt caggaacgtcatactttagctgataagggcttaatcgatctggcctttgccgtaaatgaa ttgaacggtgaccttttgggtgaagcggaaattaagactgtcggttttatttttgaaacc gacaagggaatcgaacataattttaaagaggtaatcagtcgggaaattcaggcggcgaag aagagcggcaaaccgttggcaacattcttgacctcagattatttccgccaaaaactttta gcttatttacataaagcgacggggagagaagctgaaataattattagtattgtacctgta cgtctgcgataa

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