Amygdalobacter indicium: PYS61_05215
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Entry
PYS61_05215 CDS
T09413
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aim
Amygdalobacter indicium
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aim03032
]
PYS61_05215
03036 Chromosome and associated proteins [BR:
aim03036
]
PYS61_05215
03400 DNA repair and recombination proteins [BR:
aim03400
]
PYS61_05215
DNA replication proteins [BR:
aim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PYS61_05215
Chromosome and associated proteins [BR:
aim03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PYS61_05215
DNA repair and recombination proteins [BR:
aim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PYS61_05215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WEG35331
LinkDB
All DBs
Position
complement(1236060..1236335)
Genome browser
AA seq
91 aa
AA seq
DB search
MSKNSLIEMIAENSGFTKKDSEVALKAVLAAFSSALEQGEKVSIVGFGTFEVKERKARVG
HNPVTREEIQIPASKAVTFKVSKNLKDRVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaacagtttaattgaaatgattgctgagaacagcggttttacaaagaaagat
tctgaagttgctttaaaggccgttttggctgctttcagcagtgctttagagcaaggtgag
aaggtttcgattgtcggcttcggtactttcgaagttaaagagcgtaaagcacgtgtaggt
cataatcctgtaactcgtgaagaaattcaaattcctgcaagcaaggctgttacttttaaa
gtatccaagaatttgaaagatcgcgtaaataagtaa
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