Amygdalobacter indicium: PYS61_05295
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Entry
PYS61_05295 CDS
T09413
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aim
Amygdalobacter indicium
Pathway
aim03030
DNA replication
aim03430
Mismatch repair
aim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYS61_05295
03430 Mismatch repair
PYS61_05295
03440 Homologous recombination
PYS61_05295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aim03032
]
PYS61_05295
03400 DNA repair and recombination proteins [BR:
aim03400
]
PYS61_05295
Enzymes [BR:
aim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYS61_05295
DNA replication proteins [BR:
aim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PYS61_05295
DNA repair and recombination proteins [BR:
aim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PYS61_05295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WEG35345
LinkDB
All DBs
Position
complement(1253781..1257299)
Genome browser
AA seq
1172 aa
AA seq
DB search
MAEKFVHLHVHSEYSLLDGTIRLAQLPDYLKKAGMSACAVTDHNNMFGAVEFYQKMQAAG
LQAIIGVELTVDELYHLVLLAENNEGLHNLNLLVSHACLDFASKPQVNYELLQQYHKGLI
ALSACCQGEIPQAILRNDYKVAQEIAVKYKNLFGENNFFIELPANNVPGFNLCRQQLIKL
AQELNLGLVATCDAHYLLPEDREAEDILLCLQTNSLADDPARFRLPANDFYLRSPEKMIE
LYRDCPEAIENTLLIAKRCQALKLTFGKLYLPEFQPPAAFTSTTYLQELAIKGLNRRLQH
YSSPAHSKSDYLERLNMELGVINSMGYTDYYLIVQDFVNYAKSRGIPVGPGRGSGAASLV
AYALNITDIDPLEYNLLFERFLNPERVSMPDFDIDFCYERRQEVIDYVTNKYGKDHVCQV
IAFGTLAAKACLKDILRVFGKTPKEADTYLKLIPNRLNITLKEALSASRELKMLYEQKAD
FKRAYDIALKLEGLPRHTSTHAAGVIICGKRIADIAPLTQNDGTAVVQYNKDLIEDVGLL
KFDFLGLRTLTVIAEACRKAEEKTGTEINFSKLGYADPAIYEDLSSGKTAGVFQLESSGM
TAFMQTLKPENLEDIIAGISLYRPGPMQQIPDYVKARHDSSQIKYLHPLLKKSLSLTYGA
IVYQEQVMQIVRDLAGFSLGQSDIIRRAMAKKKPELLQRYEKLFIYGGKLEDSDAAAVPG
AINNGVPEEIARKIYTYILSFAGYAFNKAHAAGYAVLAYQTAWLKHYYPCEFMTALLNSY
INTPGQLARYIAVCRTEGIKVSAPDLQLSAAKFQADSEKRTISFALAAIKNVGMSAAEDI
VKLRKRCKFVNLPDTLRNLQAENINRNKIESLIYAGALDFLPGNRLQKIMYVAEFLPTLN
TSKDKFAEQQVSLFNLSDNSDYQQENAIKFPTDKAFTFTEELNYEKEYAYVYFQGHPLDK
YPELIKSPLCTSSYVLTTENDTIAGKQLLMYGWINKIKRRSGKQQADWAILQVEDYYGDY
DVLCFAKTWQKLHNLIKENEVYLFSGKISGKNDFKPSLILQNCEAYTPAALMQMYHSTAN
NDVSLTDSDQVALFINLPVDKAGELVKIARLCKRYPGKIPVYLYDESVKHIISSKDGQGI
NLVGELLENIIDIVGLKNLSLRSLIKKKEIKN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
ttggcggagaaatttgtacatttacatgttcacagtgaatactcgcttttagacggaaca
atcaggttggcgcaactgcctgattatttgaaaaaagcgggtatgtccgcctgcgccgtg
accgatcataacaatatgttcggagctgttgaattttatcagaaaatgcaagctgccggt
ttacaggctattatcggcgtagaattaactgtcgatgaactttatcatttagttctgttg
gccgaaaataacgagggattgcataatttaaatcttttagtttcgcatgcatgtctggat
tttgcctccaagccgcaagttaactatgaactgttgcaacagtatcacaaagggctgata
gccttgtccgcctgctgccaaggcgaaataccgcaggcaatcttacgcaatgactataaa
gttgcacaggaaatcgccgttaaatataaaaatttgttcggagaaaataacttttttatt
gaattgccggccaataacgtgccgggatttaatctttgtcggcaacagttaattaaattg
gcgcaagaattaaacttggggttggtagcgacttgtgacgctcattatctattaccggag
gatcgggaagcggaagatattctgctttgtttacaaacaaacagtttggcagatgatccg
gcccgctttcgtttaccggcgaatgatttttatttgcgctcgccggaaaaaatgatcgaa
ctttatcgtgactgtcctgaagcaattgaaaatactttgcttatagccaagcgctgtcag
gctcttaaattaactttcggcaaattatatttacctgaatttcaaccgcctgcagctttt
acttcaactacatatttacaggaattggcgatcaaaggtttaaatagaagattgcagcac
tattcttcaccggcacattccaagtctgattatctggaaagattaaatatggaacttggt
gtgattaattctatgggttataccgattattatctcatcgtgcaggactttgttaattat
gctaaaagtcgaggaattcctgtaggccccggtagaggatcgggcgcagcgtctttggta
gcctatgctctgaacattactgatattgatcctttggaatacaacttgctgtttgaacgt
ttcctaaatcccgagcgtgtcagtatgccggattttgatattgatttctgctatgaaaga
agacaggaagtaattgattacgtaacaaataaatacggcaaggatcacgtttgtcaagtt
atagctttcggaactttagccgctaaagcttgtctgaaagatattttacgtgttttcggg
aaaactccgaaagaagctgatacgtacttaaaattgatacccaatcgtttgaatataact
cttaaagaagctttgagcgcaagtagagaattaaaaatgttatacgagcagaaagccgat
ttcaaacgagcttatgatattgccctaaaattggaaggattgcctagacataccagcact
catgctgcaggcgttataatttgcggaaaaagaattgccgatattgcacctttaacgcaa
aacgacggaacagcggtagttcaatacaacaaggatttaattgaagatgtcggtttgctg
aagttcgattttttaggattaagaactttaactgtaattgccgaagcttgcaggaaggcg
gaggaaaagacaggcacggaaattaatttttctaagttgggatacgctgatccggcaata
tatgaagatttgagttcaggcaaaacggcaggtgtttttcaattggaaagttccggtatg
acagcttttatgcaaacgcttaaaccggagaatctggaggatattatcgccggtatttct
ctttatcgtccgggtccgatgcaacaaatacctgattatgttaaggccagacatgattcg
agccaaattaaatatttacatcctttgttgaaaaagagcttgagtttgacttacggagct
atagtttaccaagaacaggtaatgcaaatagtgcgtgatttagcaggcttttctttagga
cagtccgatattattcggcgggcaatggctaagaaaaaaccggaacttttacaacgttat
gaaaagttatttatttacggcggtaaattggaagacagtgatgctgccgctgttccgggc
gccattaataacggggtaccggaagaaatagccagaaaaatttatacttatattttatct
tttgccggatatgcttttaataaggctcatgctgccggttacgctgtattagcatatcaa
acggcctggctgaagcattattatccttgtgaatttatgacggcgttgcttaacagttat
attaatactccgggacaattagcccgttatatagctgtatgccggacagaaggaataaaa
gtatcggcaccggatttacaactttcggctgcgaagttccaagctgattccgaaaaacgg
acaattagttttgcgttggcggcaattaaaaatgtcggtatgtcggcggctgaagatata
gtaaagctgagaaaacgctgtaaattcgttaatttgcccgatactttgcgtaatttacag
gctgaaaatatcaatcgcaataagattgagtcattgatttatgccggagcattggatttc
cttccgggtaatcgtttgcaaaaaattatgtatgtagctgaatttttgccaacactcaac
acgagcaaagataaattcgccgagcaacaggtatctttatttaatttgtctgataattcg
gattatcagcaggagaatgcaattaaattcccgactgataaagcatttacatttacggaa
gaattgaattatgaaaaagaatatgcttatgtctattttcaaggtcatcctttagacaag
tatccggaattaataaagtcccccttatgtacctcaagttatgttttaacgacggaaaat
gatacgatagccggtaaacaattactcatgtacggttggataaataaaattaaacgtcgt
tccggtaaacagcaggcagattgggctattttgcaggtagaagattattacggcgattat
gatgttctgtgttttgccaagacttggcaaaaattacataatttgattaaagaaaatgaa
gtatatcttttcagcggaaaaataagcggcaaaaatgattttaagccttcccttattttg
cagaattgtgaagcgtatacaccggcagcgcttatgcaaatgtatcattctacagcaaat
aatgatgtttcactaacggattctgaccaagttgccttatttataaatttacctgttgat
aaagcgggtgaattagtcaaaatagcaagattatgcaagcgttatcccggaaagatcccg
gtatatttgtatgatgagtcggttaaacatataatcagcagtaaagacggtcagggaatt
aatttagttggagaacttttagaaaacattattgatattgtcggcctgaaaaatttatcg
ttgcgcagtttgataaaaaaaaaggagataaagaattaa
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