Amygdalobacter indicium: PYS61_05415
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Entry
PYS61_05415 CDS
T09413
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aim
Amygdalobacter indicium
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PYS61_05415 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aim03019
]
PYS61_05415 (rnc)
03009 Ribosome biogenesis [BR:
aim03009
]
PYS61_05415 (rnc)
03036 Chromosome and associated proteins [BR:
aim03036
]
PYS61_05415 (rnc)
Enzymes [BR:
aim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PYS61_05415 (rnc)
Messenger RNA biogenesis [BR:
aim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PYS61_05415 (rnc)
Ribosome biogenesis [BR:
aim03009
]
Eukaryotic type
90S particles
RNase
PYS61_05415 (rnc)
Prokaryotic type
rRNA processing factors
PYS61_05415 (rnc)
Chromosome and associated proteins [BR:
aim03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PYS61_05415 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
CRM1_C
Motif
Other DBs
NCBI-ProteinID:
WEG35368
UniProt:
A0ABY8C3W3
LinkDB
All DBs
Position
complement(1283019..1283822)
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AA seq
267 aa
AA seq
DB search
MEVKAENFKKLVDEGVFEKYRRFLRPSYADFYKKIAYEFQDPSNLVISFTHSSFSYEQIG
KALIHNERMEFLGDAILEFIVSTYLFHYQPRLNEGKMTSLRSITVREETLALAATNINLG
DYLLLGRGEALNGGRDKPSNLANAFEALLAAIYLDYTDSNPDKKVNEIIALPKKVYNICI
SLLEPYLLQAISGNLVYDYKSKLLERIQEKYDLSALKFELASQAGPAHCPHFTVEIKLLD
KVIGKGSGKSKKEAEQNAAKEALEVNL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaaaagcggaaaattttaaaaaattggtagatgaaggggtttttgaaaaatac
cgtaggtttttacgcccgtcttatgctgacttttataaaaaaatcgcctatgaatttcag
gacccgagcaatttagtcataagtttcacgcattcgagtttttcctatgaacaaataggt
aaagctttaattcacaatgaaagaatggaatttctgggtgatgctatattggaatttatt
gtcagtacttacctgttccattatcaaccgcgtttgaatgaaggaaaaatgacaagtttg
cgttctattaccgtgcgggaagaaactttagctttagcggcgactaatattaatttaggc
gattatttacttctcgggcgaggagaagcgctgaacggcggcagagataaaccgtcaaat
ttagccaacgcttttgaagctctattagcagcgatataccttgattatacagatagcaat
ccggataagaaagttaatgaaattatagctttgcccaaaaaggtttataacatttgtatc
agtttattggaaccatatttattacaggcaatcagcggaaatttagtttatgactataag
tcgaaattgttggaacgaattcaggaaaaatacgatttatcggcgctgaaatttgaatta
gcttcacaggccggaccggctcattgtcctcattttactgtagaaataaaattgttggat
aaagttatcggcaaaggaagcggtaagagtaagaaagaagcggaacagaatgcggcgaaa
gaggcgttggaggtaaacctttga
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