Amygdalobacter indicium: PYS61_05710
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Entry
PYS61_05710 CDS
T09413
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
aim
Amygdalobacter indicium
Pathway
aim00900
Terpenoid backbone biosynthesis
aim01100
Metabolic pathways
aim01110
Biosynthesis of secondary metabolites
aim03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PYS61_05710
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PYS61_05710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aim03011
]
PYS61_05710
Enzymes [BR:
aim01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
PYS61_05710
Ribosome [BR:
aim03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PYS61_05710
Bacteria
PYS61_05710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
Spt6_S1
RNase_II_C_S1
SDH5_plant
Motif
Other DBs
NCBI-ProteinID:
WEG35424
LinkDB
All DBs
Position
complement(1357231..1359402)
Genome browser
AA seq
723 aa
AA seq
DB search
MNYKQNNLQNSSLAPASYTLAGSYGFCYGVKKAVHKAYELAEALQTGQKCYMYGAVIHNK
QVVNNLTANGFILVDKADAVAPGATVLIRAHGITGEELGRLRDKNCKVIDETCGYVRFIQ
NKIAKYHNAGYQIILAGHRGHPEIVSEISFAENNVIVVDSLAELKTLNLANLPTVLLAQT
TFNHQEFTKISNFLTLHLEQLLIFDTICRATVDRQLATKELASTKDVMIVIGDRSSSNTK
RLVDLSAEVCGETYLIESAADMAELKFKGVLAAKQVGVAASASAPDSIITEVIRIMNENT
EVTKNQEALEETAKNQNAVDKQAAETGNDVSFSDFIDNIPQLKRGEIIKGVIVRYDPDFV
YVDVKDKSEGKIPMSEFLKTPDFDLDKAIEDHQEIEIYVRSIRNTEMGKEILLSKARVDF
NKYKELLKKAYEEKTPVTVKVVSKVKDGVIASYGGADIYIHRTQLELHAVEDLDKYVGQT
LEILITAFDDSNSRRLRVTGSRRSLLAAIRDKQAEAIWDNLEVGDVYEGTVRNLTNFGAF
VDLGGLDGLIHVTELSWKHIRHPKEVLKIGDKVQVYIKDFDRESKRISLGYRKLEDDPYF
QIDEKYPVGSIVDGKVARIMPYGVFVNIAPGVDALCHISQICNRRIEKPEEVLKVGQEVQ
ARVLEVNLERRRISISIKSVMNLGEPEGSALAISKKKEEQDFPSSYRDDDGKGADINIVK
SND
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaaacaaaataatctgcaaaattcttccctggcaccggcatcatatacgtta
gccggcagttacggtttctgttacggggtaaaaaaagctgtacataaagcttatgagttg
gctgaagccttacaaaccgggcaaaaatgttatatgtacggtgctgttattcataacaaa
caggtggttaataatttaactgccaacggttttattctggtagataaagctgatgctgtt
gcgcccggggcgacggtgctgattcgggctcacggtattacaggggaagaattaggacgg
ttgcgagataagaattgcaaagtcatagatgaaacttgcggttacgttcggtttattcaa
aataaaatagctaaataccacaatgcgggttatcaaattattctggcagggcatcggggc
caccctgaaattgtaagtgaaataagttttgcagagaataatgtgattgtcgttgatagt
ttagcggagctgaaaaccttaaatttagctaatttacccactgttttactggctcaaacg
actttcaaccaccaagaatttacaaaaatttcaaattttttaactttacatcttgaacaa
ctgctcatttttgatacaatatgtagagctacagttgatcggcaactagctacgaaggaa
ttggcaagtacgaaagacgtcatgattgtcataggcgaccgaagtagttccaatactaag
cgattagttgatttatctgctgaggtgtgtggtgagacttatttgattgaaagtgcggcc
gatatggcggaactgaagttcaaaggagttttagctgcgaaacaagtaggtgttgcagca
tcagcttcggcaccagatagtataatcacggaggtcattcgtataatgaatgagaacaca
gaagtaaccaaaaaccaagaggctttagaagaaacagccaagaaccaaaatgcagtcgat
aagcaagcagccgaaacaggcaatgacgtcagtttctcggattttattgataatattccg
caattgaagcgcggagagattatcaagggtgtgatcgttcgttatgacccggattttgtt
tatgttgatgttaaagacaagtcggaaggcaagattccgatgagtgaattcttgaagaca
ccggacttcgatttggataaggctattgaagatcatcaggaaattgaaatttatgttcgc
agtattcgcaatactgaaatgggcaaggaaattttgctttccaaagctagagtggacttt
aacaaatataaggagcttttgaaaaaagcgtatgaagagaaaactccggttacagttaaa
gttgtcagcaaagtgaaagatggtgttatcgcttcttacggtggagctgatatctacatc
catcgtacacagttggagttgcatgcagttgaagatttggataaatatgtcggccagacc
ttggaaattttgattacagcgtttgacgacagcaacagcagacgtttacgtgttacaggt
tcccgccgcagcttgttggcagccattcgcgacaagcaggctgaagctatttgggataac
ttggaagtcggcgatgtttatgaaggaactgtgcgtaatttgaccaacttcggcgctttt
gtcgacttgggcggcttggacggtttgatccatgtgacggaattgtcctggaaacatatt
cgtcatccgaaagaagttcttaaaatcggtgacaaggttcaagtttatatcaaagacttt
gatcgtgaatccaagcgtatttctttaggttatcgtaagttggaagatgatccttatttc
caaatcgatgagaagtaccctgtcggttcgattgttgacggaaaagttgccagaattatg
ccttacggtgtctttgtgaatattgctccgggtgtagacgctctttgccatatttcacaa
atttgcaaccgtcggattgaaaagccggaagaagtactgaaagtcggtcaggaagttcaa
gcaagagtgcttgaagttaatttggagcgccgtcgtatttccatcagcattaagtctgtg
atgaatttgggtgagcctgaaggttcggctttagctatcagcaagaagaaggaagaacag
gatttccccagctcatatagagatgatgacggtaagggtgccgatattaatattgttaag
tctaacgactga
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