Amygdalobacter indicium: PYS61_06420
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Entry
PYS61_06420 CDS
T09413
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aim
Amygdalobacter indicium
Pathway
aim00470
D-Amino acid metabolism
aim00550
Peptidoglycan biosynthesis
aim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PYS61_06420 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PYS61_06420 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aim01011
]
PYS61_06420 (murD)
Enzymes [BR:
aim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PYS61_06420 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
aim01011
]
Precursor biosynthesis
Amino acid ligase
PYS61_06420 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
WEG35550
LinkDB
All DBs
Position
complement(1519177..1520868)
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AA seq
563 aa
AA seq
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MNNKETIVAALHSRFAGKKVLIWGLGREGKASFDFFAANFRQLELETLAVSDLNPEPCAE
CLEKAEAYGIAVSSYSAAAYPPDLSQFDLVLKSPGISCKNYVYEAKATAENSFSAPCLQI
APQTEITCQVDLFLQIYGQQTVAVTGTKGKSTTTSLLYHLLDCAEQKSALLGNIGIAAFS
RIFDLGKDVAALELSCHQLEFTTHTAKVALLTNLYPEHLDHYHNLEEYYQSKINLIRQPA
GRQWVILPAYEDNLLQRAVPVLQQEQYVFYLCRNQNDLANLQKYYDVLPRQELKKKAYIF
TFSAEKNELTFSGISLENCSENAEQSNVAALEENSWSKCTLQFSAQLQILHMKLDSVLAV
MATFAYYCEQKIAAGRSLVLPELWAEFQAEQKEHIISCLQEFTGLEHRLQYVGTYGSHPV
YNDSICTIPLAAIKALTALPQCRTIILGGLDRGLDYTELYDFLKQHEYNVIGLPTTGHTL
TAQLAVGASAAELKRYYQAKDMAEAVNLAYKITAPGKGILLSPAAASYNTYKNFEERGRC
FVAEIKRQAPASGASGVSGAETK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaagaaacaattgttgctgctttacatagccgttttgccggtaaaaaagtt
cttatctggggactggggagagagggcaaggccagcttcgatttttttgccgctaacttc
cggcaactggaacttgaaacgttagccgttagtgaccttaatcccgaaccatgtgcggaa
tgcttggaaaaagccgaagcttacggtatagctgtaagtagttacagcgcggcggcttat
ccgcctgacttatcacagtttgatcttgtgcttaaaagcccgggaatcagttgtaaaaat
tatgtctatgaagcaaaagcgacagcagaaaactcattttccgctccatgcctgcaaatt
gcgccgcaaacggaaataacctgtcaggttgacttgtttttgcaaatatacggtcagcaa
acggtagctgttaccgggactaaaggtaaatcaacaactacttcgctgctttaccatttg
cttgattgcgctgaacagaaatcggcgttgttgggcaatataggcatagctgctttcagt
cggatttttgatttgggcaaagatgttgccgccttggaactttcctgccatcagttggaa
tttaccacccatactgctaaagtggctttgttgacaaacttgtatccggagcatttggat
cattatcacaacctggaagaatattatcaatccaaaattaatctgatcagacaacctgca
gggcgtcaatgggtgattttgccggcatatgaagataatttactgcaacgtgccgtaccg
gttttacagcaagaacaatatgttttttacttgtgtcgtaatcagaacgatttggcgaat
ttacaaaaatattatgatgtattgccacgacaggaattaaaaaagaaggcctatattttt
actttttccgccgaaaaaaacgaattgacgtttagcggtatttctttagaaaattgttcc
gaaaacgctgagcagtcgaatgttgctgcgcttgaggaaaattcatggagtaagtgcact
ttgcaattttccgctcaattgcagatcttgcatatgaaactggacagtgttttagcggtg
atggcaacttttgcctattattgcgagcaaaaaattgcagctggccgcagcttggtgttg
ccggagctttgggcggaatttcaggcggaacaaaaggagcatattatcagctgcctgcag
gaatttaccggtttggagcatcgtctgcaatatgtcggtacatacggcagtcatcctgtt
tataatgattctatctgtacaattcctttggcggcaataaaagcgttgaccgcattaccg
cagtgccgcacgataatattgggtggtttggatcggggtttggattataccgagttgtac
gatttccttaagcagcatgagtacaatgttatcggcttgccgactaccggtcatacctta
acggcgcaattggctgtcggtgcaagtgccgcggaattgaaacgttattatcaggcaaag
gatatggcggaagctgtgaatctggcctataaaattacagcaccgggtaagggcattttg
ctttcgccggccgcagccagctataatacatacaaaaattttgaagaacggggtagatgc
ttcgtcgccgagattaaacggcaggcgccggcaagtggtgcaagcggtgtaagtggtgcc
gagacgaagtga
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