KEGG   Amygdalobacter indicium: PYS61_06505
Entry
PYS61_06505       CDS       T09413                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
aim  Amygdalobacter indicium
Pathway
aim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PYS61_06505 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aim03019]
    PYS61_06505 (rny)
Messenger RNA biogenesis [BR:aim03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PYS61_06505 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B dUTPase YtxH KH_NusA_2nd ABC_membrane
Other DBs
NCBI-ProteinID: WEG35561
UniProt: A0ABY8C4E6
LinkDB
Position
complement(1536016..1537572)
AA seq 518 aa
MWQTLIIAAVGLIVGFGIAYFLFNSKFSKIRQALQAEETEANRNANEIIEEAKRQGEKVK
RDYLMQVKEEVHKAKLQLDQEIRSEKENFSKERNRLEQKENNLDRKLEQNAQRVIQLDSR
DKQLSEREAKLQALEAEREVALQEVASLSLEEAKQQVLSIAEKRYYRDMAIMYKRMEDET
KEKAEAEARSIVVTAIQRFASDFVSETTVSVVDLPSDEMKGRIIGREGRNIRAFEAVTGV
DIIIDDTPGAVVLSCFNPVRREIAKMTLEKLIQDGRIHPTRIEEMFEKATKEIDQMIVKA
GDEAAFETGIIGMAPEVRHYLGRLKYRTSYGQNVLQHCIEVSKIAGMMAADLGLDSEMAK
RAGLLHDIGKSCDFEIEGTHVELGVEIAKKYKEPEVVVNAIASHHGDCEAKSEIAVLVMA
ADAVSAARPGARRENLETYVKRIEKLEKLTESFDGVAKAYAIQAGREIRVIVNPELVDDA
EMALKAHEICQKIEEELAYPGQIKVSMIRETRAIDYAR
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgtggcaaacattaataatagctgcagtcggccttattgtaggcttcggaatagcatac
ttcctctttaactcgaaatttagtaagattcgacaagctttacaggcagaagaaactgaa
gcgaacagaaatgcaaatgagattatcgaagaagctaaacgccagggtgagaaagtcaaa
cgtgactatctcatgcaggttaaggaagaagtacacaaggctaaattgcagttggatcag
gaaattcgcagtgaaaaagagaatttcagcaaagagcgtaaccgtttggagcagaaagag
aataatcttgatcgtaagttggaacagaatgcgcagagggtgattcaacttgattcgcgt
gataaacaattaagcgaaagagaagcgaaattacaggctttggaggccgaaagagaggta
gctttacaggaagttgcttcactcagtctggaagaagccaagcagcaggtgctcagcata
gccgagaaacgctattatcgcgatatggcgataatgtacaagcggatggaagatgaaacg
aaggaaaaagcggaagcggaagcccgttccatcgtggttacggctattcaacgttttgcc
tcggactttgtttccgagactacagtgtccgttgtcgatttgccgagtgatgagatgaaa
ggacgtattatcgggcgtgagggccgtaatattcgtgcttttgaggctgttacgggtgtg
gatatcataattgacgatacaccgggagcggttgttctttcctgctttaatccggtcaga
cgcgaaattgccaaaatgactttggagaaattaattcaggacggtcgtattcatccgacc
agaattgaagagatgtttgaaaaggcgaccaaagagatagatcagatgattgtcaaagcg
ggcgatgaggctgcttttgagacgggaatcatcggtatggcaccggaagtgcgacattat
ttgggacgtttgaaatatcgtacaagttacggtcaaaacgttttgcagcactgtattgaa
gtttccaagattgccggtatgatggcggcggatttgggcttggacagtgaaatggcgaaa
cgtgcgggcttattgcatgatataggcaagtcatgtgactttgaaattgaaggtacacat
gttgaattgggcgttgaaattgcgaaaaaatataaggaaccggaagttgttgtaaacgca
atagcctcacatcacggtgattgtgaagctaagagtgaaattgcggttcttgttatggcg
gctgatgccgtttcggcagcaagaccgggtgcaagacgtgagaatttggaaacttatgtc
aagagaatcgagaagttggaaaagctgacggaatcttttgacggcgtggctaaagcttac
gctattcaggccggacgtgaaattcgtgtcattgtcaatcccgagttggtcgacgatgcc
gagatggcgttgaaagcgcatgagatttgtcagaagatcgaagaagaattggcttatccg
ggtcaaataaaggtaagcatgattcgtgaaacacgagcgattgattacgcgcgttaa

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