Amygdalobacter indicium: PYS61_06505
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Entry
PYS61_06505 CDS
T09413
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
aim
Amygdalobacter indicium
Pathway
aim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PYS61_06505 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aim03019
]
PYS61_06505 (rny)
Messenger RNA biogenesis [BR:
aim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PYS61_06505 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
dUTPase
YtxH
KH_NusA_2nd
ABC_membrane
Motif
Other DBs
NCBI-ProteinID:
WEG35561
UniProt:
A0ABY8C4E6
LinkDB
All DBs
Position
complement(1536016..1537572)
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AA seq
518 aa
AA seq
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MWQTLIIAAVGLIVGFGIAYFLFNSKFSKIRQALQAEETEANRNANEIIEEAKRQGEKVK
RDYLMQVKEEVHKAKLQLDQEIRSEKENFSKERNRLEQKENNLDRKLEQNAQRVIQLDSR
DKQLSEREAKLQALEAEREVALQEVASLSLEEAKQQVLSIAEKRYYRDMAIMYKRMEDET
KEKAEAEARSIVVTAIQRFASDFVSETTVSVVDLPSDEMKGRIIGREGRNIRAFEAVTGV
DIIIDDTPGAVVLSCFNPVRREIAKMTLEKLIQDGRIHPTRIEEMFEKATKEIDQMIVKA
GDEAAFETGIIGMAPEVRHYLGRLKYRTSYGQNVLQHCIEVSKIAGMMAADLGLDSEMAK
RAGLLHDIGKSCDFEIEGTHVELGVEIAKKYKEPEVVVNAIASHHGDCEAKSEIAVLVMA
ADAVSAARPGARRENLETYVKRIEKLEKLTESFDGVAKAYAIQAGREIRVIVNPELVDDA
EMALKAHEICQKIEEELAYPGQIKVSMIRETRAIDYAR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaacattaataatagctgcagtcggccttattgtaggcttcggaatagcatac
ttcctctttaactcgaaatttagtaagattcgacaagctttacaggcagaagaaactgaa
gcgaacagaaatgcaaatgagattatcgaagaagctaaacgccagggtgagaaagtcaaa
cgtgactatctcatgcaggttaaggaagaagtacacaaggctaaattgcagttggatcag
gaaattcgcagtgaaaaagagaatttcagcaaagagcgtaaccgtttggagcagaaagag
aataatcttgatcgtaagttggaacagaatgcgcagagggtgattcaacttgattcgcgt
gataaacaattaagcgaaagagaagcgaaattacaggctttggaggccgaaagagaggta
gctttacaggaagttgcttcactcagtctggaagaagccaagcagcaggtgctcagcata
gccgagaaacgctattatcgcgatatggcgataatgtacaagcggatggaagatgaaacg
aaggaaaaagcggaagcggaagcccgttccatcgtggttacggctattcaacgttttgcc
tcggactttgtttccgagactacagtgtccgttgtcgatttgccgagtgatgagatgaaa
ggacgtattatcgggcgtgagggccgtaatattcgtgcttttgaggctgttacgggtgtg
gatatcataattgacgatacaccgggagcggttgttctttcctgctttaatccggtcaga
cgcgaaattgccaaaatgactttggagaaattaattcaggacggtcgtattcatccgacc
agaattgaagagatgtttgaaaaggcgaccaaagagatagatcagatgattgtcaaagcg
ggcgatgaggctgcttttgagacgggaatcatcggtatggcaccggaagtgcgacattat
ttgggacgtttgaaatatcgtacaagttacggtcaaaacgttttgcagcactgtattgaa
gtttccaagattgccggtatgatggcggcggatttgggcttggacagtgaaatggcgaaa
cgtgcgggcttattgcatgatataggcaagtcatgtgactttgaaattgaaggtacacat
gttgaattgggcgttgaaattgcgaaaaaatataaggaaccggaagttgttgtaaacgca
atagcctcacatcacggtgattgtgaagctaagagtgaaattgcggttcttgttatggcg
gctgatgccgtttcggcagcaagaccgggtgcaagacgtgagaatttggaaacttatgtc
aagagaatcgagaagttggaaaagctgacggaatcttttgacggcgtggctaaagcttac
gctattcaggccggacgtgaaattcgtgtcattgtcaatcccgagttggtcgacgatgcc
gagatggcgttgaaagcgcatgagatttgtcagaagatcgaagaagaattggcttatccg
ggtcaaataaaggtaagcatgattcgtgaaacacgagcgattgattacgcgcgttaa
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