Actinobacillus indolicus: EXH44_00195
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Entry
EXH44_00195 CDS
T05940
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aio
Actinobacillus indolicus
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aio03016
]
EXH44_00195 (rnd)
Enzymes [BR:
aio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EXH44_00195 (rnd)
Transfer RNA biogenesis [BR:
aio03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EXH44_00195 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
RsdA_SigD_bd
PINIT
Motif
Other DBs
NCBI-ProteinID:
QBQ62760
UniProt:
A0A4V1AXR2
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All DBs
Position
40818..41939
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AA seq
373 aa
AA seq
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MNEQINYRWIENNEQLSEICHHAMKQAVVALDTEFIRTRTYYPKLGLIQLFDGQNICLID
PLVISDFSPFITLLADTKVMKVLHACSEDLEVFQHYFKQLPQPMLDTQIMAGFIGLGQSV
GFAKLVLHYLNLELDKGASRTDWLIRPLTEVQCQYASADVYYLLPIYHALAEDLAKTPWQ
NAVKQECDALLEKRQMVSDPNKAYKEIGLAWQLNPQQLAVLQILAKWRVEEAEKRDLALN
FIIKEQNLWQIAKQQPKHTSSLLEFMHPNEVRIHGKKLLWLVEQGKAVLPEHYPAPISRI
MDEPGYKQTLKKLQQKLSEIQPDDLAVELLASKRQLNQLFTWYRKGQSTEKLPELLKGWR
AEYGKQLLESCFE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacagataaattatcgttggattgaaaataatgaacagttatcagagatttgt
catcatgccatgaagcaggctgttgtcgcattagatacggaatttattagaactcgcacc
tattatcctaaattagggttaattcaactgtttgatgggcaaaatatttgcctgatcgac
ccgcttgtaattagcgatttttcgccttttatcaccttattagctgacacaaaggtgatg
aaggtgctacacgcgtgtagtgaagatttagaagtctttcaacactattttaagcaactt
ccacagccgatgttagatacgcaaattatggctggatttattgggctagggcagtctgta
ggctttgcaaaattagtcttacattatctcaaccttgaattagataaaggtgcatcaaga
accgattggctgattcgtccattaacggaagtacaatgtcaatatgcgagcgcagatgtt
tattatttattgccgatttatcacgccttagcggaagatttagccaaaacaccttggcaa
aatgccgttaaacaagaatgtgatgcactgcttgaaaaacgacaaatggtctctgatcca
aataaagcctataaagagattggtttggcatggcagttaaatccacaacagttagccgta
ttacaaatactcgcaaaatggcgtgtggaagaagccgaaaagcgagatttggcgttaaat
tttattattaaagagcaaaatctatggcaaattgccaaacagcaacctaagcatacatca
agcttgcttgaatttatgcatccaaatgaagtgcgaattcatggtaaaaagctattatgg
cttgtggagcaaggtaaagcggtattgcctgaacattatccagcccctatttctcgaatt
atggatgagcctggctataaacagacgttaaaaaaattacaacagaaactcagcgaaatt
caacctgatgatttagctgtggaactattagcgagtaaacgtcagttaaatcagcttttt
acgtggtatagaaaagggcagagtactgaaaaattgcccgaattattaaaagggtggaga
gcagagtacggaaaacagctgttagaaagttgttttgagtaa
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