Actinobacillus indolicus: EXH44_01025
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Entry
EXH44_01025 CDS
T05940
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aio
Actinobacillus indolicus
Pathway
aio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXH44_01025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aio03019
]
EXH44_01025
03009 Ribosome biogenesis [BR:
aio03009
]
EXH44_01025
Enzymes [BR:
aio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EXH44_01025
Messenger RNA biogenesis [BR:
aio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXH44_01025
Ribosome biogenesis [BR:
aio03009
]
Prokaryotic type
rRNA helicases
EXH44_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBQ62905
UniProt:
A0A4P7CFZ4
LinkDB
All DBs
Position
complement(208643..210481)
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AA seq
612 aa
AA seq
DB search
MTETTLTFADLGLPQSILNAVTEMGYVTPSPIQQACIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLAQIDPEQRHPQMLVMAPTRELAIQVADACEQFSKNMKGIRTVTIYGGQRYDIQIR
ALKNGAQVVVGTPGRILDHIRRGTLDLSMLKAIVLDEADEMLRMGFIEDVETVMAELPED
HQTALFSATMPEPIRRITKRFMKDPQEVKIQATQRSAPDIAQSYWLVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDIAELCERNGYRAAALNGDMTQQAREQALDKLKSGRLDVIV
ATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLKNI
EHLIKKPIDEVPVPNHEILMEKRREKFKARISLQLEHHDLELYRELLEDLFTADQDHEEL
AAAMMMILQEKQKLILPPDPEIRPARGERGKGRENPRSAERRGGREHRDNNGVAMDLYRI
ELGREDGVEVRHIVGAIANEGDINSRYIGHIKLHDTYSTIELPQGMPKHLVEHFAHKARV
LSKPMQMSLLGSAGSATNATPYEDKGGRGKGRGDRNERGGRGGRDGRREERGFKDRKEGG
FKEKRFNDRGRR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacaactttaacttttgccgacttaggcttaccacaatctatccttaacgct
gtcactgaaatgggctatgtaactccatctccaattcagcaagcttgtatcccacatctt
ttaaatggtcgtgatgtactgggtatggcacaaacggggagtggtaaaacagcggcattc
tctttacctttattagcccaaatcgatccagaacaacgccatcctcaaatgttagtcatg
gcgccaacccgtgaattagccattcaagtggctgatgcttgtgagcaatttagcaaaaat
atgaaaggcattcgcacggtcacgatttacggcggtcagcgttacgatattcaaattcgt
gcattaaaaaacggtgcgcaagttgtggtgggaacccctgggcgtattcttgaccatatt
cgtcgtggcaccttagatctttctatgttgaaagcgattgtactagatgaagcggacgaa
atgttacgtatgggctttatcgaagatgtggaaacggtcatggcggaactgcctgaagat
caccaaacggcacttttctcagcaacgatgccagagccaattcgccgtattaccaagcgt
tttatgaaagatccgcaagaagttaaaattcaagcaacccaacgttctgcaccagatatt
gcacaaagctactggttagtgaacggcttccgtaaaaatgatgcgttattgcgtttctta
gaagtggaagaatttgatgcggcgattatctttacacgtactaaaacgggcaccattgat
attgctgaactctgtgaacgtaatggctatcgtgctgccgcattaaacggcgatatgacc
caacaagcgcgtgagcaagcattggacaaattaaaatcaggccgtttagatgtgattgtc
gcaacagatgttgctgcgcgtggtattgatattgaacgtatcagcctagtcgtaaactac
gacattccacttgacgcagagtcttatgttcaccgtatcggtcgtactggtcgcgctggg
cgttcaggtcgtgcattattatttgtagaaccgcgcgaacgccgtttattaaaaaatatt
gaacatttaatcaaaaagccaattgatgaagtgccagtaccaaatcacgaaattttaatg
gaaaaacgccgtgagaaatttaaagcacgcatttcattacaattagaacatcacgattta
gagctttatcgtgaattattagaagatttattcacggcagaccaagatcacgaagagtta
gcggcagcaatgatgatgatacttcaagaaaaacaaaaactcattcttccgccagatcct
gaaattcgcccagcacgcggtgaacgtggaaaaggccgtgaaaatccacgttctgctgaa
cgtcgtggcggtcgtgaacatcgtgataataacggtgttgcaatggatctctatcgtatt
gaacttggtcgtgaagatggcgttgaagtacgtcacattgtcggagcaattgctaacgag
ggcgatattaacagccgttatattggccatatcaaacttcatgacacatattcgaccatt
gaattaccgcaaggtatgccgaaacatttagttgaacactttgcccataaggcacgtgta
ttaagcaaaccgatgcagatgtcacttttaggttcagcaggtagtgcaactaatgcaaca
ccttatgaagataaaggcggtagaggaaaaggtcgaggcgatcgtaacgaacgcggcgga
cgtggtggcagagatggtcgtcgtgaagaacgtggctttaaagaccgtaaagaaggtgga
tttaaagaaaaacgttttaacgaccgtggtcgtcgataa
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