Actinobacillus indolicus: EXH44_01035
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Entry
EXH44_01035 CDS
T05940
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aio
Actinobacillus indolicus
Pathway
aio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXH44_01035 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aio03019
]
EXH44_01035 (pnp)
03016 Transfer RNA biogenesis [BR:
aio03016
]
EXH44_01035 (pnp)
Enzymes [BR:
aio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EXH44_01035 (pnp)
Messenger RNA biogenesis [BR:
aio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EXH44_01035 (pnp)
Transfer RNA biogenesis [BR:
aio03016
]
Prokaryotic type
tRNA degradation factors
EXH44_01035 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
KH_SLS1_2
aRib
Motif
Other DBs
NCBI-ProteinID:
QBQ62907
UniProt:
A0A4P7CI10
LinkDB
All DBs
Position
complement(211823..213952)
Genome browser
AA seq
709 aa
AA seq
DB search
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
DYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLFPEGFFNEIQVIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFIDNQFVLNPTMSEQRLSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPEPNTD
LINKVKALAEARIGDAYRITEKQARYEQIDAIKAEVISTLTAEDETVSEGKIIDIITALE
SQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPYSVGETGRIGSPKRREIGHGRLAKRGVLAVMPSAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQAI
PAPRAEISDFAPRIHTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAATD
NNAAKRVMERIEEIVAEVEVNAIYKGKVTRVVDFGAFVSILGGKEGLVHISQITDARVER
VADYLSVGQEVQVKVVEIDRQGRIRLTMKELNGESSTSEVVEEIQELAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactccaatcgtcaaacaatttaaatacggtcaacataccgtaacattagaaacaggc
gcaatcgctcgtcaagcgacagctgctgtgatggcaagcatggacgacaccactgttttc
gtaacagtagtagcaaaaaaagacgtgaaagaaggtcaagacttcttcccattaactgta
gattatcaagagcgtacttacgcagcaggtcgaatccctggtggtttctttaaacgtgaa
ggccgcccgtctgaaggcgaaaccttaatcgctcgtttaattgaccgtccagttcgtcca
cttttccctgaaggtttcttcaacgaaattcaagtgattgcaacagtggtttctgttaac
ccacaaatcagcccagatttagtagcgatgatcggtgcttcagctgcattatctttatct
ggtgtgcctttcaacggtccaatcggtgcggctcgtgttggtttcattgataaccaattc
gtcctaaacccaacaatgtctgagcaacgtttaagccgtttagatttagtggttgcaggt
acagacaaagcggtattaatggttgaatctgaagcagatattttaactgaagaacagatg
ttagctgcggtggtgtttggtcacgaacagcaacaagtggtgattgaaaacatcaaagaa
ttcgtgaaagaagcgggcaaaccacgttgggattgggttgctccggaaccaaatacagac
ttaatcaataaagttaaagcgttagcagaagcacgtattggcgacgcttaccgtattact
gaaaaacaagcacgttacgaacaaattgacgcaatcaaagcagaggttatctcaacatta
actgctgaagatgaaaccgtatctgaaggcaaaatcattgacatcatcactgcattagaa
agccaaatcgtacgtagtcgtattatcgcaggtgaaccacgtattgatggtcgtaccgtt
gataccgttcgtgcattagacatttgcacaggcgttttaccacgtacgcacggttcagcg
ttgtttacccgtggtgaaacacaggcattagcagttgcaacattaggtacagagcgtgat
gcacaaatcattgatgaattaacaggcgaaaaatcagatcgcttcttattccactacaac
ttccctccatattcagtaggcgaaacaggtcgtatcggttcgccgaaacgtcgtgaaatt
ggtcacggtcgtttagcgaaacgtggtgtgttagctgtcatgccaagcgcggaagagttc
ccgtatgttgtgcgtgtggtttctgaaattaccgaatcaaacggttcttcttcaatggct
tctgtgtgtggtgcttctcttgcgttaatggacgctggtgtgccaatcaaagcggctgtt
gctggtatcgcaatgggcttagtaaaagaagaagagaaatttgtggtactttcagacatc
ttaggtgatgaagaccacttaggcgatatggactttaaagtagcgggtacccgtgaaggt
gtgactgcattacaaatggacatcaaaattgaagggattacccctgaaattatgcgtatc
gcattaaatcaagcaaaaggtgcacgtatgcacattttaggcgtgatggaacaagcgatc
ccagcacctcgtgctgaaatttctgacttcgcgcctcgtattcataccatgaagatcgat
ccgaagaaaatcaaagatgtgatcggtaaaggcggtgcgacaattcgtgcattaactgaa
gaaactggcacatcaattgacattgatgatgacggtaccgtgaaaattgcagcaacagac
aacaatgcagcaaaacgtgtgatggaacgtatcgaagagatcgttgcagaagtcgaagtc
aatgcgatttacaaaggtaaagtcactcgtgtagttgatttcggtgcattcgtatctatc
cttggtggaaaagaaggcttagtgcatatttctcaaatcactgacgctcgtgtagaacgt
gtggcagactacttatctgtaggccaagaagtccaagtgaaagtggtagaaatcgaccgt
caaggtcgtatccgtttaactatgaaagagttaaatggtgaatcttcaacatcagaagtt
gttgaagaaattcaagaacttgcggaataa
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