Actinobacillus indolicus: EXH44_01245
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Entry
EXH44_01245 CDS
T05940
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aio
Actinobacillus indolicus
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aio03032
]
EXH44_01245 (topA)
03400 DNA repair and recombination proteins [BR:
aio03400
]
EXH44_01245 (topA)
Enzymes [BR:
aio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EXH44_01245 (topA)
DNA replication proteins [BR:
aio03032
]
Prokaryotic type
DNA Topoisomerases
EXH44_01245 (topA)
DNA repair and recombination proteins [BR:
aio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXH44_01245 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBQ62947
UniProt:
A0A4P7CI48
LinkDB
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Position
complement(254314..256926)
Genome browser
AA seq
870 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGRDFVVKSSVGHIRDLPTSGAEKEEKTEKAKAVSTKGMS
AEQKALVKSEKERTALVKRMGVDPYHDWNATYQILPGKEKVVSELKSLAKKADHIYLATD
LDREGEAIAWHLREVIGGENERFSRVVFNEITKNAIKQAFEKPEQLNMDRVNAQQTRRFL
DRVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEFWDILAKTSAKKG
DLALELVQHKGKKFSAKNQKEAEQAVKSLQNSAFIVTEIDKKPTSSRAKAPFITSTLQQT
ASTRLGFSVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALTMARSYIEKQFGERYLPEKP
NFYASKEKAQEAHEAIRPSDVMVKMQDLSGMEKDAERLYDLIWRQFLACQMTPAEYDSTS
LTVTAGDYELKTKGRVLRFDGWTKVLPIQGKTAEDQELPEVSLNETLKLNAVEPSQHFTK
PPARYSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRVENRRFYAEKMGEIVTDRLNE
AFSDLMNYDFTANMEDTLDQIASGNSNWKVELNRFFADFSEKLTTAELDELEGGMRPNNL
VPTDIHCPTCQRQMAIRTASTGVFLGCTGYALSPKERCKTTINLIPEAELLNVLDEDSET
NALMKRKRCPKCDTAMDSYVIDPQRKIHICGNNPNCDGYVIEEGSFKIKGYDGPIVECDK
CGSDMHLKLGRFGKYMGCTNCDNTRKILKNGEVAPPREEPVAFPELKCEKSDAYFVLRDG
ASGVFMSAHNFPKSRETRAPKVAELALYRDRLPEKLQYLADAPQQDPEGNEAIIRFSRKE
KRQYVTSEKNGKATKWIVDYLDGKWVERKK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcattagtaattgtcgagtcgccggctaaagccaaaactatcaataaatat
ttaggccgtgatttcgtcgttaaatccagtgtcggacatatccgtgatttaccaacaagc
ggcgcagaaaaagaagaaaaaaccgaaaaagctaaagcggtttcaactaaaggtatgagt
gcagaacaaaaagccttagtaaaatcagagaaagaacgtaccgctttagtgaagcgtatg
ggcgtggatccttatcacgactggaatgccacttaccaaattttaccaggtaaagaaaaa
gtggtttcagagctgaaatcccttgccaaaaaagccgatcatatctatctcgccaccgac
ttggatagagaaggggaggcgattgcgtggcatttgcgtgaggtgattggcggtgagaac
gagcgttttagccgtgtggtgttcaatgaaattaccaaaaatgcgatcaaacaagccttt
gaaaagcctgaacagctcaatatggatagagtaaatgctcaacaaacacgtcgtttctta
gatcgtgtggtgggctttatggtgtcgccgttgctttggaaaaaagtggctcgtggctta
tcggcagggcgtgtacaatctgtggctgtgaaattgttggttgagcgtgaacgtgaaatc
aaggcgttccagcctgaagagttttgggatattttagccaaaacttctgcgaaaaaaggc
gatctcgctttagaacttgtacagcataaaggcaaaaaattctcagcgaaaaaccaaaaa
gaagcagaacaagcggtaaaatctttgcaaaattctgcatttatcgtcactgaaattgat
aaaaaaccaacttcatcaagagcgaaagcgccgtttattacttccaccttacaacaaacg
gcaagtacccgtttaggctttagtgtgaagaaaacgatgatgttggcacagcgtctgtat
gaagctggctacatcacctatatgcgtaccgactcaactaacttgagtcaagatgcactg
acgatggctcgtagctatatcgaaaagcaatttggtgagcgttatttacctgaaaaaccg
aatttctatgccagcaaagagaaagcgcaagaggctcacgaagccattcgtccatctgat
gtgatggtgaaaatgcaagatctaagcggtatggaaaaagatgcagaacgcctatatgac
ctgatttggcgacaattccttgcttgccaaatgacccctgcagaatatgactcaaccagt
ttaacggtaacagcaggggattacgaactcaaaaccaaagggcgtgtattacgttttgac
ggttggacaaaagtattgccaattcaaggcaaaacagcggaagatcaagagttgccagaa
gttagtctgaatgaaaccttgaaactgaacgccgttgaacctagccaacactttaccaaa
ccgccagcacgttatagcgaagcggcgttggtgaaagagttggaaaaacgagggatcggt
cgcccatcaacctatgctgcgattatctcaaccattcaagagcgtggctatgtgcgagta
gaaaaccgccgtttctatgcagagaaaatgggcgagatcgtgacagatcgcttaaacgaa
gcctttagcgatttaatgaactacgattttacggcaaatatggaagatactcttgaccaa
attgcgtcgggcaatagcaactggaaagtcgaattaaaccgcttctttgccgatttctca
gaaaaattaactaccgcagagcttgatgaacttgaaggcggaatgcgtccgaataattta
gtgccaacagacattcactgtccgacttgccaacgccaaatggcgatccgcaccgcaagc
acaggcgtgttcttaggctgtacaggctatgctttgtcaccaaaagagcgttgcaaaacc
acgatcaacttaattccagaagcggaattgctaaacgtgttagacgaagattcggaaacg
aacgcattaatgaaacgcaaacgttgcccgaaatgtgatacggcaatggacagctatgtg
atcgatccacaacgtaaaattcacatttgcggtaataacccgaattgcgatggctatgtg
attgaagaaggttctttcaaaattaaaggctatgacggcccgattgtcgaatgtgacaaa
tgcggttcggatatgcacttaaaacttggacgtttcggcaaatatatgggctgtaccaac
tgtgacaacactcgcaaaattctcaaaaatggcgaagtcgcaccaccacgagaagaacca
gtggcattccctgagttaaaatgcgaaaaatcggacgcttattttgtgctacgagatggc
gcaagcggtgtatttatgtcggcacacaacttcccgaaatcccgtgaaacacgcgccccg
aaagtggcagaattagccttataccgtgatcgtctgcctgaaaaactacaataccttgca
gatgcaccacaacaagaccctgaaggcaatgaagccattatccgctttagccgtaaagaa
aaacgtcagtatgtgacctctgagaaaaacggcaaggcaaccaaatggattgtggattac
cttgatggcaagtgggttgagcgtaagaaataa
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