Actinobacillus indolicus: EXH44_02885
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Entry
EXH44_02885 CDS
T05940
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aio
Actinobacillus indolicus
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aio03009
]
EXH44_02885 (rlmD)
Enzymes [BR:
aio01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EXH44_02885 (rlmD)
Ribosome biogenesis [BR:
aio03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EXH44_02885 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
Methyltransf_11
MTS
TRM5-TYW2_MTfase
Methyltransf_15
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_4
DREV
Methyltransf_12
DUF4770
UPF0020
Methyltransf_23
DOT1
TERT_thumb
PrmA
Ribosomal_L22
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QBQ63254
UniProt:
A0A4P7CH28
LinkDB
All DBs
Position
complement(596205..597524)
Genome browser
AA seq
439 aa
AA seq
DB search
MALFYSDNSAKKSAKPTALQTFHIQSLDYQGLGVAKVNGKTWFIENALPNEKVEAKIIED
KRQYGRATAVRFLQKSADRQTPFCSIYNQCGGCQMQHIPLALQRETKQQTLFNRLQKLQA
EPIAFEPMLVGQGTNYRRRAKLSMAVQKNTLVVGFRQANTQEIIPLNHCDILEPELNTLL
PKLQQLFASWKNKKQLGHIELVQADNGVALLLRHIGELHSQDSEKLQRFAEQENLLLFVM
TDKDQISQWRGEVPYYQINSLTLHFSIRDFIQINREMNKQMVNKAIAWLDLQPTDRVLDL
FCGMGNFTLPIAPLVEEVVGIEGVEPMVAQAKQNAQTNQINNAKFYQTDLDKPFVDQSWA
KAHFNKVLLDPARHGAYFLLEYLSELNVEKIVYVSCNPATLVRDAEKLMTQGYRLEKSAM
IDMFPHTAHLESISLFVKN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcacttttttattctgacaattctgcaaaaaaatccgcaaaaccgaccgctttacag
acctttcatatccaatctttagactatcagggattaggcgtggcgaaagtcaatggcaaa
acgtggtttattgaaaatgcgttaccgaatgaaaaggtggaagccaagattattgaagat
aaacgccaatatggacgagcgacagcggtacgatttttacaaaaatccgcagatcgccaa
acgccattttgctcaatctataaccaatgtggtggctgtcaaatgcaacacattccactg
gctttacagcgagaaaccaagcaacagacgctttttaaccgtttacaaaaacttcaagca
gagcctatcgcatttgagccaatgcttgtcgggcaaggtacaaactaccgtcgtagagca
aagctgagtatggcggttcaaaaaaataccttagtggttggctttcgccaagcgaatacg
caagagattatccctctaaatcattgcgatattcttgagcctgaacttaatacgctttta
cccaaattacagcaactttttgccagttggaaaaataaaaaacagctagggcatattgag
ctggttcaggcggataatggggttgcattgctgttacgccatatcggcgagcttcattca
caagacagtgaaaaattacaacgctttgcggagcaagaaaatctcttgctgtttgtgatg
accgataaagatcagattagccaatggcgtggtgaagttccttattatcaaatcaacagc
ttaacacttcatttctcgatccgtgattttattcaaattaaccgagaaatgaacaagcaa
atggtgaacaaagcgatagcgtggctcgatctgcaaccgacagatcgtgtgcttgatctc
ttttgtggaatggggaattttaccttgcctatcgcaccgcttgtggaagaagtggttggc
atagaaggggttgagccgatggttgcacaagctaaacagaatgctcaaacaaatcagatt
aacaatgcgaagttctaccaaaccgatctggataaaccttttgtggatcagtcttgggcg
aaagcacattttaataaagtattgttagatcctgctcgtcacggtgcttattttctttta
gaatatttaagtgaattaaatgtcgaaaagattgtctatgtatcctgtaaccctgcgaca
ctggttcgagatgctgaaaaattgatgacacaaggttatcgattagaaaaatcagcgatg
attgatatgtttccccatacggcgcatttagaatctatctcattatttgttaaaaattaa
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