Actinobacillus indolicus: EXH44_03545
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Entry
EXH44_03545 CDS
T05940
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aio
Actinobacillus indolicus
Pathway
aio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXH44_03545 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aio03021
]
EXH44_03545 (rho)
03019 Messenger RNA biogenesis [BR:
aio03019
]
EXH44_03545 (rho)
Transcription machinery [BR:
aio03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EXH44_03545 (rho)
Messenger RNA biogenesis [BR:
aio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EXH44_03545 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
OB_RNB
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
QBQ63375
UniProt:
A0A4V0IM98
LinkDB
All DBs
Position
complement(746373..747635)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLTELKNTPVSELVRIGEEQMGLENLARLRKQDIIFAILKQHAKSGEDIFGQGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDLV
NDDKPEVSRSKILFENLTPLHANSRLRMERGNGSKEDLTARILDLASPIGKGQRGLIVAP
PKAGKTVLLQNIAQSITHNYPECELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRH
VQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAERRVFPAID
FNRSGTRKEDLLTSPDELQKMWILRKILNPMGEVEAMEFLIDKLMVAKTNDEFFEIMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttacagagttaaaaaatacacccgtatcggaacttgtccgtatcggtgaagaa
caaatggggctagaaaacttagctcgcttacgtaaacaagatattattttcgccattttg
aaacaacacgcaaaaagtggtgaagacattttcggtcaaggcgtgttagaaatcttacct
gatggttttggttttctccgttctgccgacagttcttaccttgcaggtcctgatgatatc
tatgtttccccaagtcaaatccgccgtttcaatcttcaaactggtgacaaaatcgaaggt
aaaatccgcccaccgaaagaaggcgaacgttactttgcattgctaaaagtcgatttagtc
aatgatgataaacctgaagtttctcgtagcaaaattctctttgaaaacttaaccccactt
cacgctaactcacgtttgcgtatggaacgtggtaatggttcaaaagaagatttaacagca
cgtatcttagatttagcttcaccaatcggtaaaggtcagcgtggtttgatcgtagcaccg
ccaaaagcaggtaaaaccgttttacttcaaaacattgctcaaagtattacccataactat
cctgagtgtgaattaattgttttattaattgatgaacgtccagaagaagtaacggaaatg
caacgttcggtcaaaggcgaagtgatcgcttcaacctttgatgaacctgcaactcgccac
gttcaagttgctgaaatggtaattgaaaaagcaaaacgtttagtcgaacataaaaaagat
gtcgttattttattagactctatcacacgtttagcccgtgcttacaacacagtaacccca
gcgtctggtaaaattctctctggtggtgtcgatgctaatgccttacaccgtccaaaacgt
ttcttcggtgcagctcgtaacgtagaagaaggcggtagcttaaccattattgcaacagca
cttgtggatacaggttcaaaaatggacgaagttatctttgaagagttcaaaggaacaggt
aatatggaattacacctttctcgtaaaattgcagaacgccgtgtattcccagcgattgac
tttaaccgttcaggcacgcgtaaagaagatctactcacaagcccagatgaattacaaaaa
atgtggattttacgcaaaatccttaacccaatgggtgaagtggaagcaatggaattcctc
attgataaattgatggtcgcaaaaaccaacgatgaattttttgagatcatgaaaagatct
tag
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