Actinobacillus indolicus: EXH44_08755
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Entry
EXH44_08755 CDS
T05940
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aio
Actinobacillus indolicus
Pathway
aio03030
DNA replication
aio03430
Mismatch repair
aio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXH44_08755 (dnaE)
03430 Mismatch repair
EXH44_08755 (dnaE)
03440 Homologous recombination
EXH44_08755 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aio03032
]
EXH44_08755 (dnaE)
03400 DNA repair and recombination proteins [BR:
aio03400
]
EXH44_08755 (dnaE)
Enzymes [BR:
aio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXH44_08755 (dnaE)
DNA replication proteins [BR:
aio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXH44_08755 (dnaE)
DNA repair and recombination proteins [BR:
aio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXH44_08755 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QBQ64303
UniProt:
A0A4P7CGY4
LinkDB
All DBs
Position
complement(1757357..1760833)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSQPRFVHLKVHSDFSMINGLAKVKPLIKACVANNMVAMALTDFTNFCGLVRFYGEALGS
GVKPIVGADVMVRPEPESEELYELTLLAKNNTGYHNITLLLSKAYQQGYVEFPVVEKAWL
AEHNEGVILLSGGRNGDVGKALLKENQQEAEQLLAFYQRYFHNHYYLSLCRTGRSDEERY
IQQAVTFSQKFAIPLVAVNDVMFLKQDDFEAHEIRVAIHDSFTLDDPKRPQKYSEQQYFR
SEDEMCQLFVDLPQAIENTLFIAQRCNVTIRLGEYFLPNFPTGELSTEDFLVKKAKEGLE
ERLVFLFPDPEVRADKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVSET
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYSFVDRISKLIPPDPGMTLAKAFEAEPKL
PELYDTDEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSYGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINQRLEKEGKPPVRIESIPLDDEKAFKLLK
AAKTTAVFQLESRGMKDLISRLQPSNFEDIIALVALFRPGPLESGMVQNFIDRKHGKEPI
AYPDAQYQHESLQPILEPTYGIIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
AQRATFEEGAKKQGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTSEMDNTDKIVGFYDECINMGLTVVPPDINSGKHRFSVNEKGEIVYGLGAIKGV
GEGPIDAMLEARNKDGIFKDLFDLTARVDLRKVNRRTFEGLIMAGAFDKLGPHRAALMKN
LEDALRASDQHNKMEALGQSDMFGVLTETPEEVQNAYANTPKWTEQTILDNEKATLGLYL
SGHPVGRFLKELSHYAPRKLNELQPTYRGQTATVAGMIMSSRIAVTKKGSRIGIATIEDR
AGKLDITLFSEALENFGDLLQKDQIIIATGSVQHDDFSGGLKMSARELITLDDARSRCAK
SLALAINQEQLSAKFVKDLTAIIEPYKEGTLPLHFYYQSPEGRVLLRSGVEWRVTPKETM
LMQLKAFLGESAVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacctcgttttgttcatctgaaagtacacagtgatttctcaatgattaatggc
ttggcgaaagtgaagccgttaattaaagcctgtgttgccaacaatatggtcgcaatggca
ttgaccgattttactaacttctgtggcttggtgcgtttttatggtgaagccttaggatct
ggggtgaagccgattgttggggcagatgtgatggttcgccctgaacctgagagtgaagag
ttatacgaacttacccttttagccaaaaataataccggttatcataacattaccctttta
ctttcaaaggcttatcaacaaggctatgtggaatttcctgtggtggaaaaagcgtggctg
gcagaacataatgaaggcgtgattttgctttcaggcggtcgcaatggcgatgtaggtaag
gcattattgaaagaaaatcagcaagaagccgaacagcttttggctttttatcaacgttat
ttccataatcattattatctttccctttgtcgaacagggagaagtgatgaagaacgttat
attcaacaagcggtcactttttcgcaaaaatttgcaattccgttggtggctgtcaatgat
gtgatgtttttaaaacaggacgattttgaagcccacgaaatccgtgtcgccattcacgac
agttttacgttagacgatcctaaacgcccacaaaaatattcggaacagcaatacttccgt
tcagaagacgaaatgtgtcagttgtttgtcgatttgccacaggcgattgaaaatacctta
tttattgctcaacgttgtaatgtcactattcgcttaggggaatatttcttaccgaatttc
ccgacgggcgagctttccactgaagattttttagtcaaaaaagccaaagaaggtttggaa
gagcgtttggtatttttatttccggatcctgaagtgcgagcagacaagcggtctgtttat
gatgaaagattgcaagtcgaattggacgtgatcaaccaaatgggcttccctggctacttc
ttgattgtgatggaatttattcagtggtcaaaagataacgatattcctgtcggaccgggg
cgtggttctggggcaggatccttggttgcttatgcgttgaaaattaccgatcttgatccc
cttgaatttgacttactctttgaacgtttcttaaatccggaacgggtttcgatgcccgat
tttgatgtggatttctgtatggacgggcgagatcgtgtgattgaacacgtgtcggaaacc
tatggtcgccaagcggtgtcgcagattatcacctttggtactatggcggcaaaagcggtt
attcgagatgtggggcgtgtgcttggacacccttatagctttgtggatcgcatttctaaa
ttgatcccccctgaccctggtatgaccttggcaaaagcctttgaagctgaaccaaaattg
cctgagctttatgatactgatgaagaagtgaaagccttgattgatatggctcgtaagctc
gaaggggtaacacgtaatgcaggtaaacacgcagggggggtggtgattgccccaacggcg
attaccgatttttcgccactttactgcgactcttacggtttacaccctgtgacccacttc
gataaaaatgatgtggaatatgctggcttggttaaatttgacttcttgggtttacgtacg
ctgacgatcatcaaatgggcgttagaaatgattaatcaacgcttggaaaaagaaggcaaa
ccgccagttcggattgaaagtattccccttgatgatgaaaaagcctttaaattattaaaa
gcagccaaaacgacagcagtattccagctagagtcacggggtatgaaagatctgatttca
cgcctacaaccaagtaactttgaagatattattgcgttggtagccttattccgtccaggt
ccacttgagtcgggaatggtgcagaactttattgaccgtaaacacggcaaagagccgatt
gcctatcctgatgcccagtatcagcacgagtcgcttcaaccgattttagagccaacttat
ggcattatcgtttatcaagagcaagtcatgcagattgcacaggtgttggctggctatacg
ctcggcggtgcggatttactgcgtcgtgctatgggtaagaaaaagccagaagagatggcg
gctcaacgggcgacctttgaagaaggggcgaagaagcaggggattgatggcgaattagcg
atgaaaatcttcgacttggtagaaaaattcgcaggctacggctttaataaatcgcactca
gcggcttatgcgttggtgtcgtatcaaaccttatggctcaaaacccattacccagcggag
tttatggcggcggtgatgacttcagagatggataacaccgataaaatcgtcggtttctat
gatgaatgtatcaatatgggattaaccgttgttccgcctgatattaacagcggtaaacac
cgttttagtgtcaatgaaaaaggcgaaattgtctatggtttaggggcaatcaaaggcgta
ggcgaaggcccgattgatgcgatgttagaggcccgaaataaagacgggattttcaaagat
ctgttcgatctaactgctcgggttgatttaagaaaagtcaatcgccgcacttttgaaggg
ctaattatggcaggggctttcgataaactggggcctcaccgtgcggcattgatgaaaaat
ttagaagatgcccttagagcttccgatcaacataataaaatggaagcccttggacagagt
gatatgtttggcgtactaaccgaaacccccgaagaagttcaaaatgcctatgccaacacg
ccaaaatggactgagcagaccattttggataatgaaaaagcaacgctaggtttatatttg
agcggacaccctgtcggacgtttcttaaaagagctgtctcattatgcaccacgtaaactg
aatgaattacagccaacctatcgggggcaaactgcgactgtggcaggcatgattatgtca
tcacgtattgctgttaccaagaaaggtagccgaattggtattgcaaccattgaagatcga
gcggggaaattggatattacgttattttcagaagctttagagaactttggtgacttactg
caaaaagatcaaattattattgcaacaggttcggtacagcatgatgatttcagcggtgga
ttgaaaatgtctgcccgtgaattaattacccttgatgacgctcgtagccgttgtgcgaaa
agcttagcccttgcgattaatcaagagcaactttctgcaaaatttgttaaagatctgacc
gctattattgagccttataaagaaggaacattgccattgcatttctattatcaaagccct
gaaggacgtgtattattgcgtagcggtgttgaatggcgcgttaccccaaaagaaacaatg
ctgatgcaattaaaagcatttcttggcgaaagtgccgtagaattagaatttgaatag
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