Arachis ipaensis: 107604701
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Entry
107604701 CDS
T04301
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107604701
03036 Chromosome and associated proteins [BR:
aip03036
]
107604701
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107604701
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107604701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HTH_44
HHH_9
SH2
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
107604701
NCBI-ProteinID:
XP_016161834
LinkDB
All DBs
Position
B06:99220964..99230776
Genome browser
AA seq
1647 aa
AA seq
DB search
MAKAVVSDEEDEVEYEEEERDPADGDGLEDGRDVDDDDEEDEEEGQDEYENDGFIVDDVE
DEDEQDEEERPESDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKK
GRRDTEEEPSGLSGEEFDGSGKVGRTAEEKLKRSLFGDDEGAPPEDIVEEEEQGEEEEED
ADIGEDDEMADFIVDEDVMDENGDLVRRRKLKRKKTRQAPGVSSSALQEAQELFGDVEEL
LQNRKHKLESNEYRETRLEDEFEPIVLSEKYMTEKDDQIRELDIPERMQISEESTGAPPM
DGGILEEESQWIVSQLGNGAVPWISKKITSNQNGAKELPIEKDDILRFLEMHHVQKLDIP
FIAMYRKEECLSLLKDLERSEDGDENWDKNNKTPTLKWHKVLWALQDLDRKWLLLQKRKS
ALQQYYRKRFEEESRRVYEETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPG
EVGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSAEQLGLCLSLVALHELEDPKETPE
EMASNFTCTMYDTPQEVLKCARHMAAVEISCEPSIRKHVRTHFLDHAVVSTCPTADGNTT
IDSFHQFAGVKWLREKPLSKFEDAQWLLIQKAEEEKLLQVTIKLPEEYLNKLIDQFNEYY
ISDSVSRSAQLWNEQRKLILNDAIFRFLLPSMEKEARGVLSSKAKNWLLMEYGKALWSKV
SVGPYQQKENDLSSDEEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTFRSQN
VNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHE
MDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMIATLCGPRKE
VLSWKLSSLESFLNPDDKFAMIEQVLVDVTNQVGLDINLAINHEWLFAPLQFVSGLGPRK
AASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTR
IHPESYSLAIELAKDVYEEDGTGDANDDDDAEMAIEHVRDRPSYLKNLDVEEYAAGKKRQ
NKIETFYDIKRELIQGFQEWRKQYEEPSQDEEFYMISGETEETLAEGKIVQATVRRVQAQ
KAICGLESGMTGILMKEDYTDDWRDVVELSDRIHEGDILTCKIKSIQKNRYQVFLVCRES
EMRSNRFQNNRDLDPYYHEDRSSLQSDQDKARKEKELAKKHFKPRMIVHPRFQNITADEA
MEFLSDKDPGESIIRPSSRGPSYLTLTLKIHDGVYAHKDIVEGGKEHKDITSLLRIGKTL
KIGEDTFEDLDEVMDRYVDPLVTHLKAMLNYRKFRKGTKAEVDELLRLEKSEYPMRIVYS
FGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHD
SAPSIRSVAAMVPMRSPAAGGSSGASTGSGWGGSNNEGGWKGNSYDRDRSSTPGSRTGRG
DYRHNNRDEHPSGVPRPYGGGRGRGRGRGRGSYDNNRGHGSNNERQDSGYGGSRWSSAKK
DADDLSNFPGAKVQNSPGREAFPGGWGGSGGGSSSGWGGGNSGDDNGGWGGGAGPSDTDN
GGSGWGAGSKKASDNGWSGNAGGGSGW
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccgtcgtctctgacgaagaagatgaggtcgagtacgaggaggaagagagg
gaccccgctgatggagatggtttggaagacggtcgggatgtggacgatgacgatgaggaa
gatgaagaagaagggcaggatgaatatgaaaatgatggatttatagtggatgatgttgaa
gatgaagatgagcaagatgaagaagagaggccagaaagtgatgatgagcggcagaagaag
aaaaagaggaagaaaaaggaggagtatgtccttgatgaagatgattatgagttgttggag
gataataacatcaatattcatcgtcggaaggagagcaaaaagttcaaacggctgaaaaaa
ggtcggagggataccgaggaggagccctctggattatctggtgaagagtttgatgggagt
ggtaaagttgggcgaactgctgaggagaagcttaaacgcagtttatttggtgatgatgaa
ggagctccacctgaagacattgttgaagaagaggaacaaggagaggaggaggaggaggat
gcagacattggagaagatgatgaaatggctgacttcattgtggatgaagacgtaatggat
gagaatggagatcttgtgagacgaaggaagctgaagagaaagaaaactaggcaggcacca
ggtgtctcttcatcagctttgcaagaagcacaagagttatttggtgatgtggaagaattg
ttgcagaaccgcaagcacaaactggaatcgaatgaatatagagaaactagacttgaggat
gaatttgagcctattgtcctttcagagaagtatatgacagagaaagatgaccagataagg
gagctagacattccggagagaatgcagatatctgaggagagtaccggtgctcctcctatg
gatggaggtattttagaagaggagagccaatggatagttagccaacttggcaatggtgca
gtcccttggatttccaagaaaatcacaagcaatcaaaatggggctaaggaactaccaatt
gagaaggatgatattttaagatttttggaaatgcatcatgtgcagaaattagatattcct
tttattgctatgtatcggaaggaggagtgcttaagcttattaaaagaccttgagcgatct
gaagatggtgatgagaattgggataagaataacaagacacctactctaaaatggcacaag
gttctctgggctctacaggatttggacaggaagtggttacttcttcagaagaggaagagt
gcccttcagcaatactataggaaaagatttgaagaagagtcacgccgtgtttatgaggaa
acacgactaaacttgaaccggcagttgtttgaatctgttatgagatccctgaaggaggcg
gaatctgagagggaagttgacgacgttgactccaagttcaacttgcactttccaccaggt
gaagttggtgttgatgaaggccaatacaagaggccaaaaaggaagtctatgtatagcact
ttcagtaaggcaggtctgtgggaggttgcaagcaggtttgggtgcagtgctgagcaactt
gggttatgtctctcacttgttgctctgcatgagttggaggatccaaaggaaacaccagag
gagatggcttcaaattttacatgtaccatgtatgatacccctcaagaagtacttaagtgt
gctaggcacatggcagctgttgagataagttgtgagcctagcattaggaagcatgttcgc
actcactttcttgatcatgcggtggtgtctacctgtcctactgcagatggaaatacaaca
atagattctttccatcagtttgctggtgtgaagtggttgcgcgagaagccattgtccaag
tttgaggatgcccaatggctccttatacagaaggcagaggaggagaaacttctccaagtt
actattaagcttcctgaagagtatcttaataagttaatagaccaatttaatgagtattat
attagtgatagtgttagcagatctgctcagctgtggaatgaacagaggaagctgatattg
aatgatgcaatctttcggtttctcttaccatctatggaaaaggaggcaagaggtgttttg
tcaagcaaggcaaagaattggttacttatggagtatgggaaggcattgtggagtaaggtt
tctgtggggccttatcagcagaaggaaaatgatcttagctctgatgaagaggccgctcct
agggttatggcatgttgttggggccctggcaaaccacagacaacttttgttatgttggat
tcttcaggagaagtgctagatgtgctttacactgggtctcttacttttagatcacagaat
gtcaatgaccaacaacggaagaagaatgaccaggaacgcgtgcttaagtttatgacagat
caccaaccacatgttgttgttttgggagctgtaaatttgtcttgcactcgtctaaaggaa
gatatatatgaggtcatttttaagatggtagaggaaaaccctcgagatgttgggcatgaa
atggatgggctcagcattgtgtatggggatgaatctcttccccgtctttatgaaaattca
cgaatttcctccgaacaacttccttcccaacaaggtatagtgaggcgggctgttgcactt
ggtcgatatcttcagaacccattggcaatgattgcaacattatgtggacctagaaaggaa
gtattatcatggaaactgagctctttagagagctttcttaacccagatgataagtttgct
atgattgagcaagttttggtagatgtgactaatcaggttggattagatattaatctggcg
ataaatcatgagtggttatttgcaccattgcaatttgtttccgggcttggtccacgaaag
gctgcatccttacagagatcgttggtgagagctggtgcaatttttactcggaaagacttc
ctgacagaacataaactgggtaaaaaggtgtttgtcaatgcagttgggtttttgcgtgta
cgacgaagtgggttggctgctagcagcagccagtttattgatttgctggatgatacaaga
atccatccagaatcatatagtcttgctatagagttggctaaagatgtctatgaggaggat
ggaacaggtgatgcaaacgatgatgatgatgctgagatggccattgagcatgtgagagac
cggcctagctatttgaaaaacctagacgtcgaggaatatgctgctggaaagaaacgccag
aacaagatagaaactttctatgacataaaaagagaactgattcaaggtttccaggaatgg
cgtaagcaatatgaagaaccaagccaggatgaggagttctatatgatttcaggtgagact
gaggagactctggcggaaggtaaaattgtccaagccactgttcgcagagtgcaagcccag
aaagcaatatgtgggcttgaatctggaatgactggaatccttatgaaagaagactatact
gatgattggagagacgtagttgaactttctgataggatacacgagggtgacatactcacg
tgtaaaatcaagtcaattcaaaagaataggtatcaagtcttccttgtttgtagagagagt
gaaatgagaagcaaccgttttcaaaacaaccgtgatcttgatccttactaccatgaagac
agaagctctctgcagagtgatcaagacaaagctcggaaagaaaaggagcttgcgaagaag
catttcaagccgaggatgattgtccatccacgctttcaaaatataactgctgatgaagca
atggagttcttgtctgacaaagaccctggggaaagcattattcgtcctagttcacgtgga
ccttcatatcttactttaacgctcaaaattcatgatggagtgtatgcccacaaagatata
gttgaaggtggaaaggaacataaggacattacaagcttgcttcgaattgggaagacactc
aaaattggagaggacactttcgaggatttagatgaggttatggaccgttatgttgatccc
ttggtgactcatttaaaggcaatgttaaattaccgcaagttcaggaagggtacaaaagca
gaagttgatgaacttttgaggctggagaaatctgagtatccaatgcgcattgtctatagt
tttggcatctcgcatgaacatcctggaacatttatattaacttatataagaagtacaaat
ccacatcatgagtacattggactttatccaaaaggattcagatttcgcaagaagatgttt
gaggacattgatcggcttgtggcgtattttcagaggcatattgatgatccccagcatgat
tcagccccttccataagatctgtggctgctatggtaccaatgcgaagccctgcggctggt
ggttcatcaggggcatctacaggtagtggctggggaggttcaaacaatgagggtggttgg
aagggtaactcctatgatagggatcgatcatctactcctggttccaggacaggacgggga
gattacagacacaataatagagatgaacaccctagcggagtgcctcgtccatatggcggt
ggacgtggtcgcggacgcggacgtggtcgaggttcttacgataacaatagaggacatggc
tccaataatgaaaggcaggactccgggtatggtggatctagatggagttcggctaaaaag
gatgcagatgatttaagcaattttccaggggctaaggtccaaaattctcctggaagagaa
gctttccctggtggttgggggggaagtggtggaggtagcagcagtggttggggaggtgga
aatagcggcgatgacaacgggggatggggtggtggtgcaggtccaagcgacaccgataat
ggaggctccggctggggagctggctctaagaaagcatctgacaatggatggtctggaaat
gctgggggcggctctggttggtga
DBGET
integrated database retrieval system
