Arachis ipaensis: 107604803
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Entry
107604803 CDS
T04301
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107604803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107604803
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107604803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
107604803
NCBI-ProteinID:
XP_016161985
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All DBs
Position
B06:complement(108539317..108550403)
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AA seq
690 aa
AA seq
DB search
MNVDRYLKELSGSSQRIPTEQSFHHFYLNFDEFKRPIDEIARRSQSMLESIGATTHAWNT
GVDFPSDIDDAYEWVVDMNDELLEWFDESVSEVRKAREEDEEFEEVELENGFGLVRVKKE
GRGVGKKVEAAGTTETTKPKVSFHLATVRKPQDVYDIVVNNTNVPFEHIWLEKSEDDQRF
IHPXEKHSYLEFVDKNLEGLVPMKPPAMECTPFKLVEDVKGLKELAAKLHAADEFAVDLE
HNQYRSFQGLTCLMQISTRTEDFIVDTLKLRVHVGPYLREVFKDPTKKKVLHGADRDIVW
LQRDFGIYVCNMFDTGQASRVLKLERFSLQYLLLHLCEVTANKEYQNADWRQRPLPDVMI
RYGREDTHYLLYIYDQLRIKLFALSKESESSENPLVEVYKRSYDVCMQLYEKELLTEDSY
LHIYGLLGAGFNAQQLAVVSGLNEWRDILARSEDESTGFILPNKVLLEIAKQMPVTISGL
RRLTSSKLPYVDHNLDVIVNIVRHAIQNAAPFEEAALRLKETYAAKMKEARLKAAQEASV
VDAAPVEDGVEASHLLDFEHTAEEESTVIDNSTCVNISETLPFSYDLKEDCSQHEDMNGQ
VKIKSSCLTLELPQVLGGPIDAIADALSGDSASRNRLNPNEKVKDEIKLDRIRMSVKLEP
VSAAVSADTVMIDSSIDSGCMTQNNLLGSE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgaccgctacctaaaggagctctccggctcttcccagcgaatcccgacggag
cagagcttccaccatttctacctcaacttcgacgaattcaagcgcccgatcgacgaaatc
gcacgtcgctcgcagtcgatgctggagagcatcggcgccaccacgcatgcatggaacacc
ggcgtggatttcccgtccgacatcgacgatgcttacgagtgggtggttgacatgaacgat
gagctcttggaatggtttgacgagtcagtgagcgaggttcggaaggcgagggaggaggac
gaggagttcgaggaggtggagctggagaacgggttcgggttggttcgagtcaagaaggag
ggacgtggtgttgggaagaaggtggaagcggcggggactacggaaacgacgaagccgaag
gtgtcgtttcacttagccacggttaggaagcctcaggatgtgtacgacattgtcgttaac
aacaccaacgtgccgtttgagcatatttggttggagaagagtgaggatgatcagaggttc
attcatccttnggagaaacactcttatttggagtttgttgataaaaatcttgagggttta
gtgccaatgaagcctcctgcaatggaatgcactcctttcaagctagtggaggacgtcaaa
ggattgaaggaattggctgcgaagctgcatgctgctgatgaatttgcggtggatttggaa
cataatcaatatcgttcattccaaggtttgacttgcttgatgcaaatctcaaccaggact
gaggattttattgtagatactttaaagctccgtgtccatgttgggccttatctgcgtgaa
gtctttaaggaccctacaaagaagaaggtcttgcatggagcagatcgagatattgtgtgg
ttgcaacgggattttggaatatatgtttgtaatatgtttgacacgggccaggcttctagg
gtgttaaaattggagagatttagtttgcaatatcttttactacacttgtgtgaggttact
gcaaacaaagaataccagaatgcagattggagacaacgccctcttcctgatgttatgata
agatatggcagagaagatacacactatctgctgtatatatatgaccaactgagaatcaag
ttatttgctttgtccaaggaatctgaaagttctgaaaatcctctggtggaggtttacaag
cgcagttatgatgtctgcatgcaactatatgagaaagagcttctaacagaagactcttac
cttcatatatatgggttgctgggggctggttttaatgctcagcagcttgctgttgtttca
gggcttaatgaatggcgggacattttggctcgttcagaagatgagagtactggctttatt
ttaccaaataaagtacttcttgaaatagcaaagcagatgcctgttactataagcggtctt
cggcgattgacatcatcaaagctcccatatgttgatcacaatcttgatgtcattgtcaac
attgtcagacatgccattcaaaatgctgctccttttgaagaagcggcactacgcttgaaa
gaaacatatgctgcaaaaatgaaggaagcaagattgaaagcagcacaagaagcaagtgtc
gtagatgctgctcctgttgaagatggagtagaagcttctcatctgctagattttgaacat
acagccgaagaagaaagtactgtcattgataattcaacctgtgttaatatctcagagacc
cttccattttcttatgatctgaaggaggattgctctcagcatgaagatatgaatggacaa
gtaaaaattaaatccagttgtctaactttagagcttccacaggtactaggagggcctatt
gatgctattgctgatgctctgtcaggcgattcagcttcaagaaataggcttaatcctaat
gagaaggtcaaggacgagatcaagctagatcgcattaggatgtcagtcaagctggagcca
gtttccgctgctgtgtcggctgatacggtgatgatagactccagtatagattccggctgt
atgactcagaacaacctattaggctctgaatga
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