Arachis ipaensis: 107605751
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Entry
107605751 CDS
T04301
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
aip
Arachis ipaensis
Pathway
aip04142
Lysosome biogenesis
aip04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107605751
04148 Efferocytosis
107605751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aip04131
]
107605751
Membrane trafficking [BR:
aip04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107605751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
VPS18_solenoid_2nd
zf_RING_Vps8
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
zf_RING_Vps8_fungal
Beta-prop_EML_2
zf-RING_2
WD40_Prp19
WDR55
VPS18_RING_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
zf-RING_UBOX
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107605751
NCBI-ProteinID:
XP_016163208
LinkDB
All DBs
Position
B06:136967415..136976404
Genome browser
AA seq
961 aa
AA seq
DB search
MAPIPSENGVEGDDEREEEEEEEEEEEEEEEEEEEEEEEEEAEEGEEEDDEEEPRLKYQR
MGGSIPALLSSDAASCIAVAERMIALGTHDGIVYILDFLGNQVKEFPAHSAVVNDLSFDL
EGEYIGSCSDDGSVVICGLFSDEKTKFEYHRPMKAIALDPDYTRNASRRFVAGGLAGNLY
LNSKTWLGYRDQVLHSGEGPIHAVKWRTSLVAWANNTGVKVYDTANNQRVTFIERPRDSP
RPELLLPHLVWQSDTLLVIGWGTTVKIASIRTNRYQVANGTYRNFPLSSMSQVDIVASFQ
TSYFISGIAPFDDALVVLAYVPGEDGEKDFSSTAPSRQGNAQRPEVRIVTWNNDELSTDA
LPVHGFEHYKAKDYSLAHAPFSGSSNAGGQWAAGDEPLYYIVSPKDVVIAKPRDTEDHIT
WLLQHGWHEKALAVVESSHGRSELLDEVGSRYLDHLIVERKYSEAASLCPKLLRGSASAW
ERWVFHFAHLRQLPVLVPYMPTENPRLRDSAYEVALNALATNPSFHKDLLSTIKSWPPVI
YSALSVISAIEPQLKTSSMTEPLKEALAELYVINGQHEKAVALYADLMKPEVFDFIDKHK
LHGAIREKVFQLMMIDCKRAVPLLIQAKNLISAPEVVKQLQNADNESDSRYFLHLYLHSL
FEVNPHAGRDFHDMQVELYADYDPKMLVPFLRNSQHYTLEKAYEICIRRDLIREQVFILG
RMGNSKQALAVIINKLGDIEEAVEFVTMQQDDDLWEELIQQCLNKPEMVGILLEHTVGNL
DPLYIVNKVPNGMEIPRLRDRLVKIITDFRTETSLRHGCNDILKADCVNLLVKYYKEAKQ
GICLTNEEDEPRAKRRGTNASHWKSSSFRTMEMNSKISRGGARCCICFDPFSIRDVSVIV
FFCCHAYHSTCLTDSSYTSSSKKESGVNNSDDNDNDDDDDDDELEVGGPRMRCILCTTAA
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggctccgattccgtccgagaatggcgtcgaaggagatgacgagagagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagcagaagaaggagaagaggaagatgacgaagaggagccaaggctcaagtaccagaga
atgggaggaagtatacctgcgctgctatctagcgacgcagcttcttgcatcgccgtcgcg
gaacgcatgatcgcactcggtactcacgacggcattgtctacatcctcgatttcctcggc
aaccaggtgaaagagttccctgctcattctgctgttgttaacgaccttagctttgattta
gagggtgagtatattggaagctgttccgatgatggatcagttgttatttgcggtcttttt
tccgatgagaaaacgaagttcgagtatcatcggccgatgaaggcgattgccttggatcct
gattacacaaggaatgcctctaggagatttgttgcaggtggtttagctgggaatttgtat
ttgaattcgaagacatggttaggctatcgtgaccaggttttgcactctggggaaggtcca
atacatgcagtgaagtggcgaacgagtcttgttgcttgggcaaacaacacaggagtgaag
gtttatgatactgccaataaccagcgggtaacatttattgaaaggccaagagatagcccc
aggcctgagcttttgcttcctcacttggtttggcagagtgacaccctcttggttattggc
tggggaactactgtcaaaattgcttcaataagaacaaaccgctatcaagtagccaatggg
acatacagaaattttcctttgtctagtatgagccaggtggacattgtggcatcatttcaa
actagctatttcatctcaggaattgccccctttgatgatgctctggttgttctggcgtat
gttcctggagaagatggagaaaaggactttagtagcactgctccttctcggcagggcaat
gctcaaagaccagaggttcgaatagtaacatggaacaatgatgagctttcaacagatgct
ctaccagtacacggctttgagcattacaaggcaaaggactattctcttgctcatgctccc
ttctcaggtagcagtaatgctggtggtcagtgggctgcaggtgatgaaccactttattat
attgtgtccccaaaggatgtagttattgcaaagccaagggatactgaagatcatattact
tggcttcttcaacatgggtggcatgaaaaagctttggctgtagttgaatcaagtcatggg
agaagtgaacttcttgatgaggtgggatctagataccttgatcatttgatagtggaaaga
aaatattctgaagcagcttcattgtgtcccaagttgcttcgagggtcagcctcagcttgg
gaaagatgggttttccactttgctcaccttcgtcaactccctgttttggttccttacatg
cctacagaaaatcctagactgcgtgattctgcctatgaggttgctctaaatgcattggct
acaaatccttcctttcataaggatctcttgtccactattaagtcctggccacctgtaatt
tattctgcactatctgttatttcagctattgaacctcagcttaaaacttcatccatgact
gaaccactcaaggaggcattagcagaattgtatgtaattaatgggcaacatgagaaagct
gttgctttgtatgctgatcttatgaagccagaagtatttgacttcattgataaacataaa
ctgcatggtgcaattcgtgagaaggttttccaattaatgatgattgattgcaagcgtgct
gttcctctgttaatccaagctaaaaacttaataagcgctcctgaagttgtgaagcaactt
caaaatgctgataatgagtctgactcaagatacttcttgcatttatatctccattcatta
tttgaagttaatccacatgctgggagggactttcatgatatgcaggtagaactatatgca
gactatgatccaaagatgctggtaccttttcttcgaaacagtcaacattatacccttgag
aaggcttatgagatttgcataaggagagatctaattagagagcaagtcttcatcctagga
aggatgggaaactcaaagcaagctctagctgtaattataaataaactgggagacatagag
gaggctgtagagtttgtcaccatgcagcaggatgatgatctttgggaagaactaatccag
caatgccttaacaaacctgaaatggtgggcatactattggagcacacagttggaaacctc
gaccccctctacattgtaaataaggttcccaatgggatggaaatacctcggctaagggat
cggctggtaaaaattatcactgacttcaggactgaaacatcacttagacatgggtgcaat
gatatacttaaggcggactgtgtcaaccttttagttaagtattacaaagaggcaaagcag
ggaatatgtctaactaatgaagaagatgagccacgagcgaaaaggagaggtactaatgct
tcgcactggaaatcatctagttttagaaccatggaaatgaactcaaagatctctagggga
ggtgcaagatgttgtatatgttttgatcccttttctatacgtgatgtatcggtcattgtt
ttcttttgctgtcatgcttatcactcaacttgtcttacggattcttcctacactagcagt
agcaagaaagagagtggagtcaataatagtgatgataatgataatgatgatgatgatgat
gatgatgaactggaggttggtggccctcgaatgcgatgcatattgtgtactactgctgct
agttag
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