Arachis ipaensis: 107605985
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Entry
107605985 CDS
T04301
Name
(RefSeq) F-box protein SKP2A isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
aip
Arachis ipaensis
Pathway
aip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107605985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aip04121
]
107605985
Ubiquitin system [BR:
aip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107605985
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107605985
NCBI-ProteinID:
XP_016163431
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All DBs
Position
B07:complement(117005731..117009222)
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AA seq
377 aa
AA seq
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MVGKENLRTEDLNLCFEKLMMVAGGGGGGGGGEKGGKMKAGVITEWKDIPVELLMQILSL
VDDQTVITASGVCRGWRDAIYFGLARLSLSWCSKNMNNLALSLVPKFTKLQTLILRQDKP
QLEDNTVERIANYCHDLQILDLSKSFKLTDRSLYAVAHGCPDLTKLNISGCSAFSDNALA
YLAGFCRKLKVLNLCGCVRAATDTALQAIGHYCNQLQSLNLGWCENVGDVGVMSLAYGCP
DLRIVDLCGCVLITDDSVIALASRCPRLRSLGLYYCKNITDRAMYSLAQSKVNKRMWGSV
KGGGGNDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCA
CAVHAHRAINNFPHPAH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggttggaaaggagaacctgagaactgaggacttgaacttgtgctttgagaagctcatg
atggttgctggtggtggtggtggtggtggtggtggtgagaaaggagggaagatgaaagcc
ggggtgatcactgagtggaaggatatacctgtggagcttttgatgcagattttgtccctt
gtggatgatcaaactgtgatcacagcttctggtgtttgtcgtggatggagagatgctatt
tactttggccttgctcgtttgtcactctcatggtgtagcaagaacatgaataacttggct
ctttctcttgttccgaaattcacaaaacttcaaactctaatccttcgtcaagacaagcct
caactagaggataacacagttgaaaggattgcaaattattgtcatgacctgcagattctg
gacctgagtaaaagcttcaaactcaccgatcggtcgctgtatgccgtagcccacggttgt
cctgatctcactaaactcaacatcagtggctgctctgcttttagtgacaatgctctggcg
taccttgccggtttctgcaggaagctgaaagtcctaaacctctgtggatgcgttagagca
gcaaccgatactgcgttacaggctattggacactactgtaatcagttacagtctttgaac
cttggatggtgtgagaatgttggtgatgttggagtgatgagtttagcatatggctgtcct
gatctaagaatagtggacctgtgtggctgtgtccttataacagatgatagtgtgattgca
ttggcaagcagatgcccaaggctcaggtccctaggactatactactgcaagaacataaca
gatagggcaatgtactcattggcacagagcaaagtgaacaagagaatgtggggatcagtg
aaaggaggaggaggaaatgatgaagacgggcttagaactctcaacataagccaatgcaca
gcactgacaccatctgcagttcaagctgtttgtgactcattcccttcactccacacatgc
tcaggtagacactcactcatcatgagtggttgcctcaacttgacttcagttcattgtgct
tgtgctgttcatgctcaccgtgctatcaacaatttccctcaccctgctcattga
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