KEGG   Arachis ipaensis: 107606030
Entry
107606030         CDS       T04301                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
aip  Arachis ipaensis
Pathway
aip03030  DNA replication
aip03410  Base excision repair
aip03420  Nucleotide excision repair
aip03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107606030
   03410 Base excision repair
    107606030
   03420 Nucleotide excision repair
    107606030
   03430 Mismatch repair
    107606030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aip03032]
    107606030
   03036 Chromosome and associated proteins [BR:aip03036]
    107606030
   03400 DNA repair and recombination proteins [BR:aip03400]
    107606030
DNA replication proteins [BR:aip03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    107606030
  DNA Replication Termination Factors
   ELG1-RFC complex
    107606030
Chromosome and associated proteins [BR:aip03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    107606030
DNA repair and recombination proteins [BR:aip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     107606030
  Check point factors
   HRAD17(Rad24)-RFC complex
    107606030
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 AAA_22 Rad17 AAA_16 RuvB_N Mg_chelatase AAA_14 AAA_11 AAA_5 AAA_assoc_2 ADK AAA_24 nSTAND_NTPase5 SLFN-g3_helicase ResIII AAA_2 nSTAND3 AAA_28 AAA_30 PhoH AAA_19 AAA_25 AAA_7 NPHP3_N NB-ARC RNA_helicase DNAX_ATPase_lid TIP49 ATPase_2 AAA_18 Parvo_NS1 DUF815 HrpA_pilin
Other DBs
NCBI-GeneID: 107606030
NCBI-ProteinID: XP_020962023
LinkDB
Position
B07:118227367..118235411
AA seq 341 aa
MAPIMQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTIQHKGGYPCPPYKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
NRILYICNEEGLNLDAKALSTLSSISQGDLRRAITYLQSAARLFGSSISSEDLISVSGVV
PAEVVEAILKACKSGNFDSANKEVNNFIAEGYPASQILTQLFEAILEDDISDEQKARIAK
KLGEADKCLVDGADEYLQLLDTVSTTMQAFCNMPEGFAYGS
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcgccaatcatgcaatcctctcagccttgggtcgaaaaataccgaccaaaacaagtg
aaagacgtagctcaccaagaagaagttgttcgtgtcctcaccaacactctcgaaactgga
agctgcccccacatgctcttctatggaccccccggcaccggaaaaacaaccactgctctt
gcaatagctcaccagcttttcgggcctgagctttacaagtctagggtgctggagctcaat
gcaagtgatgaccgtgggattaatgttgttcgcaccaagataaaggattttgcagccgtc
gcagttggtactattcagcacaagggtggttatccttgtccaccatataagattattgtc
ttggatgaggcagattcaatgactgaagatgctcagaatgccctgagacgaacgatggaa
acttactctaaagttactcggttctttttcatatgcaactacatcagcaggatcatagaa
ccactggcttcaaggtgtgcaaaattcaggttcaagccattgtcagaagagatcatgagc
aaccgaatactgtacatttgcaatgaagaaggactcaatcttgatgctaaggctctttca
accctgagttctatctctcaaggagatcttcgtcgggctatcacatacttgcagtcagcg
gctcgattatttggatcttccatttcttcagaggacctgatttcagtatctggggttgtt
ccagcagaggtagtggaggcaattctgaaagcatgcaaaagtggaaattttgattcagcc
aacaaggaagtaaacaatttcattgcagagggatatccagcctctcagatactaactcag
ttatttgaggccattcttgaagatgacatatcagatgaacagaaagcaagaatcgccaag
aagctgggagaagcagataagtgtctggttgatggtgctgatgaatacttgcagcttctt
gacacagtcagcactacaatgcaagctttttgtaacatgccggaaggatttgcttatggg
agttag

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