Arachis ipaensis: 107606030
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Entry
107606030 CDS
T04301
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
aip
Arachis ipaensis
Pathway
aip03030
DNA replication
aip03410
Base excision repair
aip03420
Nucleotide excision repair
aip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107606030
03410 Base excision repair
107606030
03420 Nucleotide excision repair
107606030
03430 Mismatch repair
107606030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aip03032
]
107606030
03036 Chromosome and associated proteins [BR:
aip03036
]
107606030
03400 DNA repair and recombination proteins [BR:
aip03400
]
107606030
DNA replication proteins [BR:
aip03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107606030
DNA Replication Termination Factors
ELG1-RFC complex
107606030
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107606030
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107606030
Check point factors
HRAD17(Rad24)-RFC complex
107606030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
Rad17
AAA_16
RuvB_N
Mg_chelatase
AAA_14
AAA_11
AAA_5
AAA_assoc_2
ADK
AAA_24
nSTAND_NTPase5
SLFN-g3_helicase
ResIII
AAA_2
nSTAND3
AAA_28
AAA_30
PhoH
AAA_19
AAA_25
AAA_7
NPHP3_N
NB-ARC
RNA_helicase
DNAX_ATPase_lid
TIP49
ATPase_2
AAA_18
Parvo_NS1
DUF815
HrpA_pilin
Motif
Other DBs
NCBI-GeneID:
107606030
NCBI-ProteinID:
XP_020962023
LinkDB
All DBs
Position
B07:118227367..118235411
Genome browser
AA seq
341 aa
AA seq
DB search
MAPIMQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTIQHKGGYPCPPYKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
NRILYICNEEGLNLDAKALSTLSSISQGDLRRAITYLQSAARLFGSSISSEDLISVSGVV
PAEVVEAILKACKSGNFDSANKEVNNFIAEGYPASQILTQLFEAILEDDISDEQKARIAK
KLGEADKCLVDGADEYLQLLDTVSTTMQAFCNMPEGFAYGS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaatcatgcaatcctctcagccttgggtcgaaaaataccgaccaaaacaagtg
aaagacgtagctcaccaagaagaagttgttcgtgtcctcaccaacactctcgaaactgga
agctgcccccacatgctcttctatggaccccccggcaccggaaaaacaaccactgctctt
gcaatagctcaccagcttttcgggcctgagctttacaagtctagggtgctggagctcaat
gcaagtgatgaccgtgggattaatgttgttcgcaccaagataaaggattttgcagccgtc
gcagttggtactattcagcacaagggtggttatccttgtccaccatataagattattgtc
ttggatgaggcagattcaatgactgaagatgctcagaatgccctgagacgaacgatggaa
acttactctaaagttactcggttctttttcatatgcaactacatcagcaggatcatagaa
ccactggcttcaaggtgtgcaaaattcaggttcaagccattgtcagaagagatcatgagc
aaccgaatactgtacatttgcaatgaagaaggactcaatcttgatgctaaggctctttca
accctgagttctatctctcaaggagatcttcgtcgggctatcacatacttgcagtcagcg
gctcgattatttggatcttccatttcttcagaggacctgatttcagtatctggggttgtt
ccagcagaggtagtggaggcaattctgaaagcatgcaaaagtggaaattttgattcagcc
aacaaggaagtaaacaatttcattgcagagggatatccagcctctcagatactaactcag
ttatttgaggccattcttgaagatgacatatcagatgaacagaaagcaagaatcgccaag
aagctgggagaagcagataagtgtctggttgatggtgctgatgaatacttgcagcttctt
gacacagtcagcactacaatgcaagctttttgtaacatgccggaaggatttgcttatggg
agttag
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