KEGG   Arachis ipaensis: 107606051
Entry
107606051         CDS       T04301                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
aip  Arachis ipaensis
Pathway
aip03030  DNA replication
aip03410  Base excision repair
aip03420  Nucleotide excision repair
aip03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107606051
   03410 Base excision repair
    107606051
   03420 Nucleotide excision repair
    107606051
   03430 Mismatch repair
    107606051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aip03032]
    107606051
   03036 Chromosome and associated proteins [BR:aip03036]
    107606051
   03400 DNA repair and recombination proteins [BR:aip03400]
    107606051
DNA replication proteins [BR:aip03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    107606051
  DNA Replication Termination Factors
   ELG1-RFC complex
    107606051
Chromosome and associated proteins [BR:aip03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    107606051
DNA repair and recombination proteins [BR:aip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     107606051
  Check point factors
   HRAD17(Rad24)-RFC complex
    107606051
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 AAA_assoc_2 ATPase_2 DNAX_ATPase_lid AAA_11 AAA_5 AAA_30 AAA_14 DUF815 AAA_7 ResIII AAA_24 RuvB_N AAA_3 bpMoxR nSTAND3 AAA_19 AAA_25 MCM AAA_28 AAA_2 Gp44_lid NB-ARC TIP49 ABC_tran TniB Mg_chelatase SLFN-g3_helicase RNA_helicase
Other DBs
NCBI-GeneID: 107606051
NCBI-ProteinID: XP_016163503
LinkDB
Position
B07:118777954..118782090
AA seq 363 aa
MAETISPMEIDGNETPFPSSTDKGKRVFVAGNNSGKGKATPWVEKYRPQSLDDVAAHRDI
ISTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGKQYHKMILELNASDERGIDVV
RQQIQDFASTQSLTFGAKALVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV
NKIIPALQSRCTRFRFAPLDEVHVTDRLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALN
ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFSESFRRIHEIKTRKGLALV
DIVREVTMFVFKIKMPPDVRVQLINDLADIEYRLSFGCNDKLQLGSIIATFTRARSALVA
AAK
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcggagactatctctcccatggaaatcgacggcaacgaaacccctttcccttcaagt
accgacaagggtaagagggtcttcgtcgccgggaacaactccggtaaaggcaaggccact
ccgtgggtcgagaagtaccgccctcagtccctagatgacgtcgctgctcaccgtgacatc
atcagtaccattgataggctgactactgagaacagattgccacatcttctactatatggt
ccacctggcacgggcaaaacttcgactattcttgccgtggcacgcaaactctatggaaag
caataccacaagatgattttggagctcaatgcctctgatgaaagaggaattgatgttgta
cggcagcagattcaagattttgctagcacccagagcttaacatttggtgcaaaggcctta
gtgaaattggtcttgctagatgaagcagatgccatgacaaaggatgcccaatttgcatta
cgtagagtgattgagaaatatacaaaaagtacaaggtttgcacttatctgcaatcatgta
aataagattatccctgcactacaatcaaggtgcactcgatttcgatttgcccctcttgat
gaagtccatgtcactgatagactgaagcatgttattaaagctgaagggcttgatgttgaa
gacagtggcttagctgcacttgttcgccttagcaatggtgatatgagaaaggctttgaat
attcttcagtcaacgcatatggcttctcagcagataacagaagaagctgtatacctgtgc
actggaaatccattgcccaaagatattgagcaaatatcttattggctgctaaatgaacaa
ttttcagagagttttagaagaatacatgaaatcaagacaaggaaaggattggccctggta
gatattgtgagagaagtgacaatgtttgtctttaagattaagatgcctccagatgtccga
gtacagttgattaatgatttggcagacatagagtacagattaagttttgggtgcaatgac
aagcttcagcttggttcaattattgctacgtttactcgagccagatctgcactggttgct
gctgctaaatag

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