Arachis ipaensis: 107606241
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Entry
107606241 CDS
T04301
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
aip
Arachis ipaensis
Pathway
aip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107606241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aip03009
]
107606241
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107606241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
NBCH_WD40
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Cytochrom_D1
DUF7165
CFAP43_N
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
107606241
NCBI-ProteinID:
XP_016163753
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Position
B07:123450417..123454240
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AA seq
554 aa
AA seq
DB search
MSLISQNARTKAKKTQREEDIKEPPNHEEVEDGKDSDDEALKAKKRKREQSEMQQVREMK
KLESFLFGSLYSPVEFGKEDNEVETGDKKSSDLFFTDRSANSVLSVYEGDADISEESDDD
RAAVQRKPVWVDDEEEKATINIANVNRLRKLRKEEDEDLISGSEYVSRLRAQHVKLNPGT
DWAQIDSRSKIDRSSDDESDEENEAALNQGNKDVDDILRTNEDLVVKSSSKLLPGHVEYS
KLVDANIQDPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPVR
KASFLPDGSQVILSGRRKFFYSFDLVKAKVDKVGPLVGREEKSLENFEVSPDSKLVAFVG
NEGYILLVSTKTKQLVSTLKMNGTVRSLAFAEDGQQLLSGGGDGQVYHWDLRTMTCMHKG
VDEGCINSTALSTSPGGKLFAAGSDSGIVNIYNREEFLGGKRKPIKTIENLTTKVDFMKF
NHDSQILAICSCMKKSSLKLIHIPSYTVFSNWPPPNASLSYPRCLDFSPGGGFMAVGNSA
GKVLLYKLHHYQHA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgatatctcaaaatgctcgcactaaagctaagaagacccaaagggaggaggac
atcaaagaacctcccaatcatgaagaggttgaggatgggaaagattctgatgatgaagct
ctgaaggcaaagaagaggaagcgagaacagtcagaaatgcaacaagtgagagaaatgaaa
aagctggaaagctttttgtttggctctctgtattcccctgttgaatttggaaaggaggat
aatgaagtagaaactggggataaaaagagctcggatttgtttttcactgaccgttctgca
aatagtgtgctttctgtttatgagggagatgctgacatttcagaggaaagtgatgatgat
agggctgccgtgcagagaaaacctgtatgggtggatgatgaagaagaaaaggccactatt
aacatagcaaatgttaacaggttaaggaagttgaggaaggaagaggatgaggatttgatt
tctggttcagagtatgtgtcaagattgagggctcagcatgtaaagctgaacccaggaact
gattgggcacagattgattcgaggtccaaaatagatagatcttctgatgatgagtcagat
gaagaaaatgaagctgcattgaaccaaggtaacaaggatgtggatgatattctgagaaca
aatgaagacctagttgtgaagagtagctcgaaactactgcctggacatgttgaatactca
aagctagttgatgctaatatacaggatccatctaatggcccaataaattctgttcagttc
catagaaatgctcagctccttcttgctacaggattggacagaaagcttagattttttcaa
attgatggcaaacgtaacaccaagattcaaagcatcttccttgaagattgccccgttcgg
aaagcttctttcttgccagatgggtctcaggttatcttatcgggaagaagaaaatttttc
tatagttttgatttggttaaggctaaggttgataaagtaggtcctttagttggtagggaa
gagaaaagtttggaaaattttgaggtctcgcctgattctaaattagtagcttttgtgggt
aatgagggttacattttattagtttcgacaaaaacaaagcaattggttagtaccttaaag
atgaacggaacagtccgatccttagcttttgcagaagatggacagcagttgttgagcggt
ggcggtgatggccaggtttaccactgggatctgagaacaatgacatgcatgcataaaggt
gtagatgaaggctgcataaacagcacagctcttagtacttctccaggtggaaaacttttc
gcagctggttcagacagcggaattgtgaatatttacaatagagaggaattcctcgggggc
aagaggaagcctatcaagaccattgagaatttgaccactaaagtagattttatgaaattc
aatcacgattctcaaatattagcaatctgttcatgcatgaaaaagagcagtttgaaattg
atacatatcccgtcatatactgtgttttccaactggccaccgccgaatgcaagcctgagt
tacccccggtgtcttgattttagtccaggtggtggtttcatggctgtaggaaactctgca
ggaaaggtgttattgtacaagttgcaccattaccagcatgcataa
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