Arachis ipaensis: 107606245 Help Entry 107606245         CDS       T04301                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism aip  Arachis ipaensis Pathway aip03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:aip00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     107606245  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aip03021]     107606245    03019 Messenger RNA biogenesis [BR:aip03019]     107606245 Transcription machinery [BR:aip03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      107606245 Messenger RNA biogenesis [BR:aip03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      107606245     U7-dependent histone pre-mRNA processing factors      107606245 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  107606245 NCBI-ProteinID:  XP_016163757 LinkDB All DBs Position B07:complement(123530497..123548439) Genome browser AA seq 1329 aa AA seqDB search MASSSRDQALSLFAAANNHGDVNVKLSSLTQAKDLLLSLDPSLSADLFPFFLELQSSPES LVRKLLIQLIEEIGFKAVDHSPALVSILLTFLRDADPIIVKQSIVSGTNIFCNVFVEMIV QFQQYGKVERWLEGVWMWMLKFKDAVFGIALEPGSAGIKLLGLKFLEIFVLLFTPDNNSP EKSTGEGSRQAANISWLVGGHPLLDPVALKSEANRTIGILLNLLQPGASLPGCLTITVIN CLSAIARKRPQHYDTIFSALLDFNPNFQTAKRYHIASVQYSLRTAFLGFLRCTYSPILES RERLIKTLRAMNAADAADQVIRQVDKIIKNGDRSTRDARVIKDDQSSIQSHVSGELSRKR AIPLDNEHLANGHEAISKRIRSGPDPHLTLPVQVNDFGQDLNSVNGVSLNATALDGELTA VEQMIALIGALLAEGERGAESLEILVSKIHPDLLADIVITNMKHLPKTPPPLARIGNSPV PQQVGSQFSQSKVLSPSAPVSSIQSLAVTDQAPFPSTTITATSSSLSDINNLPADSKRDP RRDPRRLDPRRIAATLGGAAGSVGDDIVATKLELDDPVSLIKPSSPPVASAEENNQSEAT INLKNEDIISEGPSLSGPDRLTPKTEVLERPGDTQHIAEAIASLDSSVIPSDATDEDRST VKLLEDTEANETDSLDFDQFSPDVQVASTSEDTCLELPQLPPYVDLTYEQETKVKHLAIR HIIESYRHLDGTGCQQFCMPLLARLVAQIDDDNEFIVMLQNQIVEDHWQKGHELVLYVLY HLHCLTVLDSVENSSSSSVLYEKFLLGVAKSLLESFPASDKSFSRLLGEVPLLPESALNI LSDLCCSDVVDHNGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHPQDEIR AKAIRLVTNKLYQLSYIAEDVEKFATDTLLSAVDHDVSQSGPSEQRPEVEVACQEISGTS QVSESTLSEHDSDRTTKPMAQSLPSISFSEAQRLISLFFALCTKKPSLLQIVFDVYGRAP RMVKQAFHRHIPILLRALGQSYTELLHIISDPPQGSENLLTLVLQILTQDSTPSLELIST VKRLYETKFKDVSILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPAL TPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLF MRTVIQAIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPP PQLESALNRHANLRGPLASYANQPAVKSTLPRATLEVLGLASESHVQQHLPTSLHPSDTN SSVQGATLT NT seq 3990 nt NT seq  +upstreamnt  +downstreamnt atggcctcttcctccagagaccaagccctctctctcttcgccgccgccaacaaccacggc gacgtcaacgtcaagctctcatccctcacccaagccaaggacctccttctctccctcgac ccttctctctccgctgacctcttccctttcttcctcgagcttcagtcctctcccgaatcc ctcgttcgcaaattgctcatacagttaattgaggagattggttttaaagcagtcgatcat tctcctgcacttgtttctatactattaacatttttgcgagatgctgatccgataattgta aagcaatctattgttagtggcacgaacatcttctgtaatgtttttgtggagatgattgtg cagtttcaacaatatggtaaagtagagaggtggttagaaggggtttggatgtggatgctt aagttcaaggatgctgtttttgggattgctcttgagcctggttctgccggaataaagttg ctgggactgaaattcttggaaatattcgtcttgctttttactcctgacaacaatagtcct gagaaatcaactggagaaggatctaggcaagctgctaatatatcatggttggttggtggt caccctcttcttgatccggtggctctcaagtcggaggcaaacaggaccattggcattcta ttaaatttattgcagcctggtgcaagtctccctggttgtttaacaattactgttataaat tgtttatcagctattgcaaggaaacggccgcaacactacgatacaattttttctgcattg ctcgattttaatccaaattttcaaacagcgaaaagatatcatattgccagtgttcagtac tctttaagaactgcttttttggggtttcttaggtgcacttattcacctatactagagtct cgagaaagattgataaagaccctgcgggccatgaatgcagcggatgctgccgatcaggtc atcagacaagttgacaaaattattaaaaacggtgatcgttctacacgtgatgctcgggtt atcaaggatgatcaatcatcaattcagtcacatgtttcaggggaattatctagaaaaaga gctattcctttggataatgaacatctggccaatggtcacgaggcaatctctaagcggatt cgatctggtcctgaccctcacttaactttaccagttcaagtaaatgactttggacaggat cttaactctgttaatggagtatcacttaatgctactgcactagatggtgaattaactgca gtggagcaaatgattgctttgattggtgctttgcttgctgaaggagaaagaggtgctgaa tctcttgaaatccttgtttccaagattcatcctgatctgttggcggatattgtgataaca aatatgaagcacttgcctaagacacccccaccgctagcaaggattgggaattcgccagta cctcaacaagttggttcccaattcagtcaatcaaaagttttatcaccatctgctccagta agttctatccaatcattggctgttactgaccaagcaccattcccttcaactacaatcact gccactagttcatcactgtctgacatcaataatttgcctgctgattctaaacgcgaccca cgcagggatccccgtcgcttggatccacggcgtatagctgcaactcttggtggggcagct gggtctgttggagatgatattgtggcaacaaaattagagttagatgatcctgtatctttg attaagccttcttcacctcctgttgcctccgctgaagaaaataatcaatctgaggcaaca atcaatctgaaaaatgaggatatcatttctgaaggtccctcactttctggacctgatcgg ctaactcccaagacagaggttctggagaggcctggagatacccagcacattgcggaagca attgcttctttggattcctcagtcattccctctgatgcaactgatgaagatcgtagtaca gtgaagctgttggaggatactgaagcaaatgagaccgactcattagattttgatcagttt tctcctgatgtccaagttgcatctacatcagaagatacctgtctagaactaccacagcta ccaccatatgtggatctaacctatgagcaggaaactaaggtgaagcacctggctattagg catattatagagtcatacaggcatttggatgggacaggatgtcagcaattttgcatgcca ctccttgctcggcttgtagctcagattgatgacgataatgagttcattgtgatgttgcaa aaccaaattgtggaagaccactggcaaaagggtcatgaactagtgctgtatgttttgtac catctgcactgcctcacagtattggattcagttgaaaactcttcctcttcttctgtcttg tatgaaaagtttctcttgggagtggccaaatctttgttggaatcttttccggcttcagac aaatcttttagtaggcttcttggtgaagttccacttttgccagaatctgccttgaatatt ttgagtgatctctgctgttctgacgttgttgatcataatggaaaaattattcgtgatatc gaacgtgtaactcaaggtctaggtgctatatggagtttaattttggggcgtccacaaaat cgccaagcgtgcttgggcatagcattaaagtgtgctgttcacccacaagatgagattcga gcaaaagctattcggctggtgacaaacaagctctatcagcttagttacattgcagaagat gttgagaaatttgccactgatactcttctttctgccgtagaccatgatgtttcgcaatct ggaccctctgaacagagacctgaggtagaggttgcatgtcaggaaataagtggcacatca caggtctcagagtctaccctttcagaacacgactctgatagaaccactaagccaatggct caaagtcttccgtctatatcattctctgaagctcaacgcttaatttctttatttttcgct ttatgtacaaagaaacctagtcttcttcagattgtatttgatgtctatgggcgagcccca aggatggttaagcaggcttttcatcgccacattcctattcttctgagggcattagggcaa tcttatactgaattgcttcatattatatctgatccaccacaaggaagtgaaaatcttttg acactggtactgcaaatattgactcaagattcaacaccatcattggaactgatatctact gtaaaacgtctatatgaaactaaatttaaggatgtttcaattctggttccactgctgtca tcactctccaaaaaggaggtgttaccaatattcccccgccttgttgacctaccattggag aagtttcagagggcacttgctcacatactacagggatcggctcatacaggtccagcatta acgccggttgaagtgttggtcgcaatccatggaattgttcccgagaaagatggccttgca cttaagaagataacagatgcttgttcagcatgttttgagcagcgtacagtgttcacacaa caggttctggcaaaagcattgaaccagatggttgaccaaactccgttgcctctacttttc atgaggacagttattcaggcaattgacgctttccctgcattggttgattttgttatggag atactttcaaaacttgtgactaaacaggtgtggcgcatgccaaaactttgggttggtttt ttaaaatgcgtataccagactcaaccgcgttcttttcatgtattattgcagttgccaccg ccacaactggaaagtgctcttaacaggcatgctaacctcagaggtccccttgcttcctat gccaatcaaccagcagtaaaatctacacttcctagagcaactttagaagttctgggtctt gcaagtgaatctcacgtgcagcaacatttgccaacatcattgcacccatctgacacaaat tcttcagttcaaggagcaacactgacatga

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