Arachis ipaensis: 107606270
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Entry
107606270 CDS
T04301
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107606270
Transcription machinery [BR:
aip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107606270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
UPF0240
Motif
Other DBs
NCBI-GeneID:
107606270
NCBI-ProteinID:
XP_016163792
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Position
B07:124118412..124122120
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AA seq
562 aa
AA seq
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MGLLNLRLNYNASSAAIQSPFSFNNHSCITLSSAGGTEATFNSARLSSLSTVNEEGEASQ
RSFPTAFSCLSSELETLDNDSLYIEEIKVKKGKRSISSVQEMLNNTQRQRHFEKEISTAS
LKFQSFRAIHYRLLMENLGTLEQTFADSEAIKLKSDIVLQLGKLGALELFNVCLSRSLEL
SSHAVELGEHQKENRKIDEKIDKVFVKSTRKKQHKRRTQKAFTAMEVRLQPSTSKADDKE
YRLHSLPASVKKASNRKNTRIMVARREAEMSKGVKVLAELEKIREGIEESTNQVASLKSW
AEAAGVHEKVLQQKLHYCQRCRDELIRSTRSLVVYLARKYRGMGIALEDLLQAGYIGVLQ
GAVRFDYTRGYRFSTYVQYWIRKSISRMVERYAREIVVPWSLSRAMNQIQKAQKSLKITS
MKSPDDHEIAKATGLSLEKIRSAGNCLRVVASTNQKMGDSLSVKYTEFMPDMSIENPEEA
VMKQHMRKDLYDLLKGLDSREREILTLRFGLRDHHSKSLEEIGRYFKVSKECVRKIERKA
LTKLRNKAATSNFNFYLLDLDS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcttaacctgaggctcaattataacgcttcttctgctgctattcagtctcct
ttctctttcaacaatcactcatgtatcacactttcttctgctggaggaacggaagcaact
ttcaactcagcgaggctatcttcgctttcgaccgtaaatgaagaaggagaagcatcccag
agaagctttccaacagcattcagttgtttgtcatctgaattggaaaccttggacaatgat
tctttatacatagaagaaatcaaggtgaagaagggtaagaggtctattagtagtgtgcaa
gaaatgcttaataatacacaaagacaaaggcattttgaaaaggagatatcaacagcctcc
ctcaaatttcagtcttttagagcgatacattatcgtttgttaatggaaaatctaggcact
ttggaacaaactttcgctgattctgaggcgattaaattgaaaagtgacattgtattgcaa
cttggaaagcttggagctctggaattgttcaatgtctgtctgtcgaggtctcttgaactg
tcgtcacatgccgttgaactcggagagcaccagaaggaaaacaggaaaatagatgagaag
atagataaagtgtttgttaagtctaccaggaaaaaacagcataaaagaagaactcagaaa
gcatttactgctatggaagttcggctgcagccgtcgacttcaaaagctgatgataaggaa
tatagattgcattcccttcctgcttctgtaaagaaagcttcaaatcgtaaaaatacaaga
ataatggttgctagaagggaggcagaaatgtcaaaaggagtaaaggttctcgcagagttg
gagaaaattcgagaaggaatagaagagagtacaaatcaagtagcaagcttgaaaagctgg
gcagaagcagctggagttcatgagaaggtgctacagcagaagttgcattactgccaacgt
tgtcgtgacgagcttatacgaagtactcgttccttggttgtttaccttgcaaggaagtac
aggggtatgggaatagcactggaagatctacttcaggcaggatatataggtgttctccag
ggagctgtgagatttgactatacaaggggttatagattctcaacttatgtgcagtattgg
ataaggaaatcaatttccagaatggtggaacgatatgctcgagaaatcgtagttccttgg
tcattgagcagggccatgaatcagatacagaaagcacaaaaatccctgaaaattacctcc
atgaaaagcccagatgatcatgaaatcgcaaaggcgacaggtctgtctttggaaaaaatt
agatcagctggaaattgtctgagagttgttgcttcgaccaatcagaagatgggagactct
cttagtgtaaagtatacggaatttatgcctgatatgtcaatagagaatcctgaagaagct
gtgatgaagcaacacatgagaaaggacttatatgatctcttgaaaggcttggattcaaga
gaaagagaaatattaaccctccgttttggtcttagagatcatcattcaaagtcacttgaa
gaaatagggagatatttcaaagttagcaaagaatgtgtgaggaagatagaaaggaaagct
ctaacaaaattaaggaacaaagcagctacatcaaatttcaatttttatttattggattta
gattcttag
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