Arachis ipaensis: 107608086
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Entry
107608086 CDS
T04301
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aip03036
]
107608086
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aip00535
]
107608086
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107608086
Meiosis-specific proteins
Cohesin complex and associated proteins
107608086
Proteoglycans [BR:
aip00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107608086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
APG6_N
CCDC39
COG6_N
AAA_29
DUF1664
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
107608086
NCBI-ProteinID:
XP_016165461
LinkDB
All DBs
Position
B07:complement(5904947..5959222)
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AA seq
1204 aa
AA seq
DB search
MYIKQVVIEGFKSYKEQIATEPFSPKVNCVVGANGSGKSNFFHAIRFVLSDLYQNLRNED
RHSLLHEGAGHQVVSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKISSLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYAIYSKEVQDAQQKLM
EIEEARAKVSETSAKKYNDVLDAHEKIKDLENTLKDVSKELQNSNKEKESIEKRRTKALK
KHTELELDVKDLQEKITGNIRAKEDAARQLKILEKNIQDSNDELEKIRPKYEEQVMEEKE
ITKRIMEREKQLSILYQKQGRATQFPSKAARDKWLRKEIEDLERVLSSNSGQEKMLLEEI
GRLKGELDGCDETIEKCRSQITTLQSHIDQSRQGFNKYKVQRDKLQDKRKSLWDKENTLT
AEIDKLRAEVEKAEKSLDHAIPGDVRRGMNSVRKICREYNISGVYGPIIELLSCEEKFFT
AVEVTAGNSLFHVVVENDDTSTQIIRHLNAHKGGRVTFIPLNRVRAPRITYPQSSDVIPL
LKKLNFKHDYNPAFSQVFARTVVCKNLDVASRVARTDGLDCITLDGDQVSKKGSMTGGFY
DHRRSKLKFMNIIKQNEDEIHSKEEELMKVRSDLQEIDQKITELVSEQQKIEAECAHGKS
EMEQFKQDIANANKQKQLISKALSKKEKSLLDVQNQIEQLKASMAMKTAEMGTELIDHLT
PEEKKLLSDLNPEIKELKEQLVACKTDRIETEARKAELETNLTTNLRRRKQELEAVISSA
DDDTLGVDAGLKAQELSDAKLLVDDASEQLRRVSNSISARSKEIKQIKEEINKLKSLEDE
YERKLQEETKELEQLLSKKNIYSAKEEEYTKKIRELGPLTSDAFETYKRRNIKELHKVLH
RCNDQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGGHDDDDDDEDGPREANPEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADFSTTQFITTTFRPELVKVADKIYGVTHKSRVSRVNVVSKDDALEFIEHDQM
QNAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaagcaggttgtgattgaaggttttaagagttacaaagagcaaattgcaaca
gagcctttcagtcctaaagttaattgtgttgttggtgctaatggatccgggaagtcaaac
tttttccatgccattcgttttgtgttgagtgatctctatcagaacctacgcaatgaggat
cgacattcattactccatgaaggggctgggcaccaggttgtatctgcgtttgtggagatt
gtgtttgacaattcagacaaccgtattccggttgacaaggaggaagtgcgtttgcgccgg
actattggtttgaagaaggatgagtattttttagatggaaaacacataacaaaaactgaa
gtgatgaatttactggaaagtgctgggttctctcgctcaaatccttactatgttgtgcag
caaggaaagatatcgtcactaacattgatgaaagactcagaacgactggatttattgaaa
gaaattggcggtactagagtttatgaggagcggcgtcgtgaaagtctgaaaattatgcag
gaaactggtaataaaagaaagcaaataattcaagttgtacagtatctagatgagaggttg
aaggaattggatgaggagaaagaggaactacggaaatatcagcagcttgacaagcagaga
aaatctttggaatatgctatttatagcaaagaagttcaagatgctcaacaaaaacttatg
gagatagaagaagcccgagccaaggtttctgaaacatctgcaaaaaagtataatgatgtg
cttgatgcccatgagaaaatcaaagatttagagaatacattgaaagatgtctcaaaagaa
cttcaaaactctaacaaagagaaagaaagtatagaaaagagacgaacaaaggctttaaag
aagcatacagagcttgagcttgatgtcaaggacctacaagagaagattactggaaatatt
cgagcaaaggaagatgctgcaagacaactgaagatacttgagaagaacattcaagattca
aatgatgagctggagaaaatcagacctaaatatgaggaacaagttatggaagaaaaagaa
atcaccaagcgaataatggagcgtgagaaacagctcagtatactctaccaaaagcaaggg
cgtgcaacccagtttccgagtaaagctgctcgtgacaagtggcttcgcaaggagatagaa
gatcttgaacgagtgctttcctcaaactcagggcaggaaaaaatgctcttggaggaaatt
ggtcgtcttaaaggtgaactggatggctgtgatgagaccattgagaaatgtagatctcag
attactactttgcaatctcacattgaccagtcacggcaagggtttaataaatataaagtt
caaagagataagttgcaggataagaggaagtccttatgggacaaagaaaatacacttact
gctgaaattgataagctgagagctgaagttgagaaggctgaaaagagccttgatcacgca
attcccggtgatgtcagaagggggatgaactcagttcggaaaatctgcagggagtataac
atttctggtgtttatggtccaatcattgagttgctgagttgtgaagagaaattcttcaca
gcagttgaagttactgcaggaaacagcttattccatgtggttgttgaaaatgatgacacg
tcaacccagataattagacatcttaacgcacataaaggtggacgagttacatttatccca
cttaacagagtgagggcaccacgcattacttatccccagagttctgatgtcatccctctc
ttaaagaaattgaattttaaacatgactataaccctgcattcagtcaggtatttgcccga
acggttgtgtgcaagaatttggatgtggcttcaagggttgccaggactgatggtcttgac
tgcataacactggatggtgatcaagttagcaagaaaggtagtatgacgggaggattttat
gatcacagacgatcaaaattgaagtttatgaatatcattaagcaaaatgaagatgaaatt
cactcaaaagaggaggaattgatgaaagttagatctgacctgcaagagatagaccaaaag
atcactgaacttgtttccgagcagcagaagattgaggctgagtgtgctcatggaaaatca
gaaatggaacaatttaagcaggacattgcaaatgctaacaagcagaagcaattgatttct
aaggcactttcaaaaaaggaaaagtcacttcttgatgtccagaatcagattgaacagctt
aaagctagtatggcaatgaaaacagccgagatgggcacggaactaattgaccatttaacg
ccagaggaaaagaagcttctgtctgatttgaatcccgaaatcaaggaacttaaagagcag
cttgttgcatgcaagactgatcgtatcgagacggaagcacggaaagcggagctggaaact
aatctaacgacaaacctgaggagaagaaagcaagagttggaagctgtaatatcatctgct
gatgatgacactctgggtgtagatgctggattgaaggcgcaggaacttagcgatgctaaa
ttgttagttgatgatgcatcagagcagcttagaagagtctctaatagtataagtgctcga
tcaaaggaaattaaacagatcaaagaagaaatcaataagttgaagtcattggaggatgag
tatgaaagaaaacttcaggaagaaacaaaagaattagagcagttgctgagtaaaaaaaat
atatattctgctaaagaagaagaatatacaaagaaaataagggaactgggcccattgaca
tcagatgcatttgagacgtacaagaggaggaacatcaaagaattgcataaagtgttgcac
aggtgcaatgatcaactgcagcagttcagtcatgtaaacaagaaagcgcttgaccagtat
ataaattttacagaacaacgagaggaacttcagaaaaggcaagctgaacttgatgcagga
gatgagaaaattagagagctaatatctgtacttgatcaacggaaggatgaatcaatagag
cgcactttcaaaggtgttgctaggcattttcgagaagtgttttctgaactcgtacagggg
ggtcatggtcatctggttatgatgaagaaaaaggatggtggtcacgatgatgatgatgat
gatgaggatggtcctcgtgaagcaaacccagagggtagagtagaaaagtacattggagtg
aaagtgaaggtttcttttactggacaaggagagacacagtccatgaagcagttgtctggg
ggtcaaaagactgtagttgctcttacacttatctttgccatacaacgatgtgatcctgct
ccgttttatctatttgatgagattgatgcggctctggatccacaatacagaactgctgtt
ggaaatatgatccgccgtctggcagacttttcaaccacacaatttatcacaacaacattc
cgcccagagcttgtgaaagttgctgacaagatctatggagtaacgcataaaagccgggtt
agccgtgttaatgttgtatccaaggacgatgctctagaatttatcgagcatgatcagatg
caaaatgctgaataa
DBGET
integrated database retrieval system
