Arachis ipaensis: 107608087
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Entry
107608087 CDS
T04301
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X4
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aip03036
]
107608087
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aip00535
]
107608087
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107608087
Meiosis-specific proteins
Cohesin complex and associated proteins
107608087
Proteoglycans [BR:
aip00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107608087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
ATG14
APG6_N
CCDC39
AAA_29
DUF1664
Motif
Other DBs
NCBI-GeneID:
107608087
NCBI-ProteinID:
XP_016165462
LinkDB
All DBs
Position
B07:complement(5906542..5923692)
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AA seq
1202 aa
AA seq
DB search
MYIKQVVIEGFKSYKEQIATEPFSPKVNCVVGANGSGKSNFFHAIRFVLSDLYQNLRNED
RHSLLHEGAGHQVVSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKISSLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYSKEVQDAQQKLMEIE
EARAKVSETSAKKYNDVLDAHEKIKDLENTLKDVAKELQNSNKEKESIEKRRTKALKKHT
ELELDVKDLQEKITENIRAKEDAARQLKILERNIQDSNDELERIRPMYEEQVMEEKEITK
QIMEREKQLSILYQKQGRATQFSSKAARDKWLRKEIEDLERVLSSNSGQEKMLLEEIGRL
KGEMDGCDETIEKCRSQITTLQSHIDQSRQGFNNYKVQRDKLQDKRKSLWDKENTLTAEI
DKLRAEVEKAEKSFDHAIPGDVRRGMNSVRKICREYNISGIYGPIIELLNCEEKFFTAVE
VTAGNSLFHVVVENDDTSTQIIRHLNAHKGGRVTFIPLNRVRAPRITYPQSSGVIPLLKK
LNFKHDYNPAFSQVFGRTVVCKNLDVASRVARTDGLDCITLDGDQVSKKGSMTGGFYDHR
RSKLEFMNIIKQNEDEIHSKEEELMKVRSDLQEIDQKITELVSEQQKIEAECAHGKSEME
QFKQDIANANKQKQLISKALSKKEKSLLDVQNQIEQLKASMAMKTAEMGTELIDHLTPEE
KKLLSDLNPEIKELKEQLVACKTDRIETEARKAELETNLTTNLRRRKQELEAVISSADDD
TLGVDAGLKAQELSDAKLLVDDATEQLSRVSNSISARSKEIKQIKEEINKLKSLEDEYER
KLQEETKELEQLLSKKNIYSAKEEEYAKKIRELGPLTSDAFETYKRRNIKELHKALHRCN
DQLQQFSHVNKKALDQYINLTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIERTF
KGVAWHFQKVFSELVPGGHGLLFMMKKKEGGHDDDEDDEVGPREANPEGRVEKYIGVEVK
VSFTGQGKTQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPRYRTAVGNM
IRCLADFSTTQFITTTFRPELVTVADKIYEVTHKSRVSRVNVVSKDDARLFQKLKTNERF
IL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaagcaggttgtgattgaaggttttaagagttacaaagagcaaattgcaaca
gagcctttcagtcctaaagttaattgtgttgttggtgctaatggatccgggaagtcaaac
tttttccatgccattcgttttgtgttgagtgatctctatcagaacctacgcaatgaggat
cgacattcattactccatgaaggggctgggcaccaggttgtatctgcgtttgtggagatt
gtgtttgacaattcagacaaccgtattccggttgacaaggaggaagtgcgtttgcgccgg
actattggtttgaagaaggatgagtattttttagatggaaaacacataacaaaaactgaa
gtgatgaatttactggaaagtgctgggttctctcgctcaaatccttactatgttgtgcag
caaggaaagatatcgtcactaacattgatgaaagactcagaacgactggatttattgaaa
gaaattggtggtactagagtttatgaggagagacgtcgtgaaagtctgaaaattatgcag
gaaactggtaacaaaagaaaacaaataattcaagttgtacagtatctagatgagaggttg
aaggaattggatgaggagaaagaggaactacggaaatatcagcagcttgacaagcagaga
aaatctttggaatatagcaaagaagttcaagatgctcaacaaaaacttatggagatagaa
gaagcccgagccaaggtttctgaaacatctgcaaaaaagtataatgatgtgcttgatgcc
catgagaaaatcaaagatttagagaatacattgaaagatgttgcaaaagaacttcaaaac
tctaacaaagagaaagaaagtatagaaaagagacgtacaaaggctttaaagaagcacaca
gagcttgagcttgatgtcaaggacctacaagagaagattactgaaaatattcgagcaaag
gaagacgctgcaagacaactgaagatacttgagagaaacattcaagattcgaatgatgag
ctggagagaatcagacctatgtatgaggaacaagttatggaagaaaaagaaatcaccaag
caaataatggagcgtgagaaacagctcagtatactctaccaaaagcaagggcgtgcaacc
cagttttcgagtaaagctgctcgtgacaagtggcttcgcaaggagatagaagatcttgaa
cgagtgctttcctcaaactcagggcaggaaaaaatgctcttggaggaaattggtcgtctt
aaaggtgaaatggatggctgtgatgagaccattgagaaatgtagatctcagattactact
ttgcaatctcacattgaccagtcacggcaagggtttaataattataaagttcaaagagat
aagttgcaggataagaggaagtccttgtgggacaaagaaaatacacttactgctgaaatt
gataagctgagagctgaagttgagaaggctgaaaagagctttgatcacgcaattcccggt
gatgtcagaagggggatgaactcagttaggaaaatctgcagggagtataacatttctggc
atttatggtccaatcattgagttgctgaattgtgaagagaaattcttcacagcagttgaa
gttactgcaggaaacagcttattccatgtggttgttgaaaatgatgacacgtcaacccag
ataattagacatcttaacgcacataaaggtggacgagttacgtttatcccacttaacaga
gtgagggcaccacgcattacttatccccagagttctggtgtcatccctctcttaaagaaa
ttgaattttaaacatgactataaccctgcattcagtcaggtatttggccgaacggttgtg
tgcaagaatttggatgtggcttcaagggttgccaggactgatggtcttgactgcataaca
ctggatggtgatcaagttagcaagaaaggtagtatgacgggaggattttatgatcacaga
cgatcaaaattggagtttatgaatatcattaagcaaaatgaagatgaaattcactcaaaa
gaggaggaattgatgaaagttagatctgacctgcaagagatagaccaaaagatcacagaa
cttgtttccgagcagcagaagattgaggctgagtgtgctcatggaaaatcagaaatggaa
caatttaagcaggacattgcaaatgctaacaagcagaagcaattgatttctaaggcactt
tcaaaaaaggaaaagtcacttcttgatgtccagaatcagattgaacagcttaaggctagt
atggcaatgaaaacagccgagatgggcacggaactaattgaccatttaacaccagaggaa
aagaagcttttgtctgatttgaatcccgaaatcaaggaacttaaagagcagcttgttgca
tgcaagactgatcgtatcgagacggaagcacggaaagcggagctggaaactaatctaaca
acaaacctgaggagaagaaagcaagagttggaagctgtaatatcatctgctgatgatgac
actctgggtgtagatgctggattgaaggcgcaggaacttagcgatgctaaattgttagtt
gatgatgcaacggagcagcttagtagagtctctaatagtataagtgcacgatcaaaggaa
attaaacagatcaaagaagaaatcaataagttgaagtctttggaggatgagtatgaaaga
aaacttcaggaagaaacaaaagaattagagcagttgctgagtaaaaaaaatatatattct
gctaaagaagaggaatatgcaaagaaaataagggaactgggcccattgacatcagatgca
tttgagacgtacaaaaggaggaatatcaaagaattgcataaagcgttgcacaggtgcaat
gatcaactgcagcagttcagtcatgtaaacaagaaagcgcttgaccagtatataaatttg
acagaacaacgagaggaacttcagaaaaggcaagctgaacttgatgcaggagatgagaaa
attagagagctaatatctgtacttgatcaacggaaggatgaatcaatagagcgcactttc
aaaggtgttgcttggcattttcaaaaagtgttttctgaactcgtaccggggggtcatggt
cttctgtttatgatgaagaagaaggagggtggtcacgatgatgatgaggatgatgaggtt
ggtcctcgtgaagcaaacccagagggtagagtagaaaagtacattggagtggaagtgaag
gtttcttttactggacaaggaaagacacagtccatgaagcagttgtctgggggtcaaaag
actgtagttgctcttacacttatctttgccatacaacgatgtgatcctgctccgttttat
ctatttgatgagattgatgcggctctggatccacgatacagaactgctgttggaaatatg
atccgctgtctggcagacttttcaaccacacaatttatcacaacaacattccgcccagag
cttgtgacagttgctgacaagatctatgaagtaacgcataaaagccgggttagccgtgtt
aatgttgtatccaaggacgatgctagattgtttcaaaaattaaaaaccaatgagcggttt
atactatag
DBGET
integrated database retrieval system
