Arachis ipaensis: 107608747
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Entry
107608747 CDS
T04301
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107608747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107608747
03012 Translation factors [BR:
aip03012
]
107608747
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107608747
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107608747
Translation factors [BR:
aip03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107608747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_19
NACHT
nSTAND3
AAA_22
ATPase
T2SSE
AAA_14
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
107608747
NCBI-ProteinID:
XP_016165952
LinkDB
All DBs
Position
B07:30319597..30337971
Genome browser
AA seq
1083 aa
AA seq
DB search
MPSQPEEASSRPSASLANDIAVEWKQKLITLLDDESKQELISREKKDRREFQQIAALASK
MGLYSHVYAKVVVISKVPLPNYRPDLDDRRPLREVSIPISMLRRVDAYLEEYQTQKSRMK
ETFPDLSFARSTNNDSIGVDERLFEKPQLPALNKAALEKILRQRSLQMRDQQQAWQESAE
GRRMLEFRRSLPAYKEKEAILSTILRNQVVIISGQTGCGKTTQLPQFILECEIESLQGAA
CNIICTQPRRISAISVSERVALERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRL
IADRKLKDVTHIIVDEIHERGMNEDFLLIVLKDLLPRRPEMKLILMSATLDAELFSSYFN
GAAIIKIPGFTHPVRTCFLEDVLELSGYRLTPDNQIDDYGQERIWKMNKQAPRKRKSQIA
SVVEDSLREADFKDYDPQTRESLSCWNPDCMGFNFIEYILCHICEDERPGAVLVFMIGWD
DISALKEKLLLHPLLGDQSRVLLLICHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSI
TINDVVFVLDCGKEKESSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGECYHLYPRC
VYDAFAEYQLPEILRTPLQSLCLQIKSLKLGPISEFLSKALQSPEILAVQNAIEYLKIIG
AFDDNENLTLLGHYLTMFPMEPKLGKMLILGAIFNCLDPILTVTASLSVRDPFLAPLDQK
DVAAAAKSQFSHDYSDHLALVRAYDGWKDAEIDLAGQEYCWANFLSSQSMKAIDALRMEF
LSLLKDIGIVDSNATNCNAWSYDVHLIRAVIFYGLYPGICSIVHKEKSFSLKTMEDGKVH
LHLNSVNARESKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGKISKDGDGQLKML
GGYLEFLMKPAVAEMFQSIRRKLDDIIQSKLLFPMMGIHLFHELLSAVRLLISKDKCEGR
FVFSCQVIKPSKPSVMTLQPALVSRTDSGPGGDNSKGQLQTLLARAGCAAPIYKTMQIQN
NQFQAAVEFNGIQIMGQPCHNKRTAEKDAAAEALQWLMGKRQAENEYMDHNAVMLKKSKR
DHN
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcaaccggaagaggcttcgtcacgtccaagtgcttcccttgcgaatgatatt
gctgtggagtggaagcagaaattaatcacacttttagatgatgagagtaagcaagagttg
atctcgagagagaagaaggataggcgtgagttccagcaaatagcagctttggcaagcaaa
atgggattgtacagccatgtgtatgcaaaagttgttgtcatcagtaaggttccacttccc
aactacagacctgatttggatgatcgacgtccgctgagggaggtaagcatacctatttct
atgttaaggcgagttgatgcttatcttgaagaataccaaacccaaaaatccagaatgaag
gaaacttttccagatttgtcatttgcaagatcaacaaataacgatagtattggtgtggat
gaaaggttatttgagaaacctcagttgccagcattgaataaggctgctttggagaaaatt
ctccggcagagaagcttgcaaatgcgtgatcagcaacaagcttggcaggagtcggcagaa
ggtagaagaatgctagaatttcgtagaagtctccctgcttataaagagaaggaagcaata
ttgtcaacaatattgaggaatcaggtggttatcatttcgggacaaacaggatgtgggaag
acaacacaactcccacagtttattttagaatgtgagatagaatctcttcagggagctgct
tgtaatatcatatgcacacaaccaaggcgcatatcagcgatatctgtttctgagagggtt
gcgcttgagagaggggagaaattgggtgaatctgttggatataaggttagattggagggt
ataaaagggagagataccaggcttctcttttgcacaacaggcatcttattaagaagatta
atagctgatagaaaattaaaagatgtaactcatattattgtggatgaaattcatgagcgt
gggatgaatgaagattttcttctcattgtccttaaagatctcctacctcgccgaccagaa
atgaaactgattttaatgagtgctacccttgatgcggagctcttctcctcatactttaat
ggagctgcaataatcaagattccgggtttcacgcaccctgtcagaacctgttttttggag
gacgttttggaattgtcaggctacagattgactcctgataatcaaattgatgattatggt
caagaaaggatttggaaaatgaacaaacaggcccctagaaaaaggaaaagccaaattgct
tctgttgtagaggattctttaagggaagctgatttcaaagattacgatccacaaacacga
gaatctttgtcatgttggaatcctgattgcatgggttttaacttcatagaatatatttta
tgccatatatgtgaggatgaaaggccaggtgctgtgttggtttttatgattggatgggat
gatataagtgcactgaaagagaagctccttttacatcctcttttgggagatcaaagccga
gttttgcttcttatatgccatggatcaatggcaagctctgagcagagattaatatttgaa
gaacctgaagatggagtgcgaaaaatagtgttagcaacaaatattgctgaaacgagtatc
acaataaacgatgttgttttcgttcttgactgtggaaaggaaaaagaatcatcatatgat
gctcttaataacacaccttgtttgcttccaacctggatctctaaggtttctgcccaacaa
agaagaggaagagctggtcgagttcaaccaggagaatgttaccatctctatcctagatgt
gtttatgatgcttttgcagagtatcaattgccggaaattttgagaacacctttgcaatct
ctctgcttgcaaattaaaagtttaaaacttggaccgatatcagagttcttgtctaaggca
ttacagtctccagagattcttgcagtgcaaaatgcaattgaatatttaaaaataattgga
gcttttgatgacaatgagaatctgactcttctagggcactacctgacaatgtttccgatg
gaacccaaactagggaagatgcttatattgggtgctatcttcaattgcctggatcccata
ttaactgtcactgccagcctgagtgtgagagatccatttctagcaccgttggaccaaaaa
gatgttgcagctgcagcgaagtctcaattctcccatgattatagtgatcatcttgccctt
gtgagggcttatgatggctggaaagatgctgaaatagacctcgctggacaagaatactgc
tgggcaaatttcctttcttcacaatccatgaaagctattgatgcccttcggatggaattc
ttatcccttctcaaggatattggaatagttgatagcaatgcaacaaactgcaatgcgtgg
agctatgatgtgcatcttatacgagcagttattttttatgggctatatcctggaatttgc
tctattgtgcataaagagaagtcattttctctgaagacaatggaggatggtaaagtgcat
cttcatttgaattcagtgaatgctcgagaaagcaaaattccatatccgtggcttgttttt
aatgagaagataaaagtgaattcggtgttccttcgtgactcaactgctgtgtctgactca
gtggtgcttctttttggtggaaagatctcaaaagatggtgatggtcaattaaaaatgtta
ggagggtatctggagttcttaatgaaacctgctgttgctgaaatgtttcagagcataagg
aggaaactagatgacatcattcagagcaaactactgtttccgatgatgggaatacactta
tttcacgagctgctttctgctgtacggttgctgatttccaaagataaatgtgagggcaga
tttgtgtttagctgccaggtcattaaaccatcgaaaccatctgtgatgaccttgcaacca
gcattggtttcaaggacagacagtggacctggtggcgataattctaaaggtcagctccaa
actcttctggctcgtgctggatgtgctgcacccatctacaagactatgcaaatacagaac
aatcagtttcaggctgcggtcgagtttaatggtatacagataatgggccaaccttgtcac
aataaaaggactgcggaaaaagacgccgcggctgaggcactgcaatggcttatgggtaaa
agacaggcagaaaacgagtacatggatcacaatgcagtgatgctaaagaaaagcaagagg
gatcataattaa
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